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anamox2_curated_scaffold_118

Search features with annotation key words

Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_118_1
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..441)
DNA (441bp) protein (147aa)
Putative transposase of IS885 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q7WWS7_CUPNH
tnpA; transposase of IS885
Putative transposase of IS885 {ECO:0000313|EMBL:AAP86164.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
anamox2_curated_scaffold_118_2
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(724..4137)
DNA (3414bp) protein (1138aa)
Putative acyl-CoA carboxylase Tax=Gordonia rhizosphera NBRC 16068 RepID=K6VAA7_9ACTO
Putative acyl-CoA carboxylase {ECO:0000313|EMBL:GAB93143.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
hypothetical protein
anamox2_curated_scaffold_118_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4206..5435)
DNA (1230bp) protein (410aa)
Uncharacterized protein Tax=Afipia clevelandensis ATCC 49720 RepID=K8PJP0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42842.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
major facilitator superfamily transporter
anamox2_curated_scaffold_118_4
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5524..6681)
DNA (1158bp) protein (386aa)
transferase Tax=Citromicrobium bathyomarinum RepID=UPI0001DD042C
Transferase {ECO:0000313|EMBL:KEJ94232.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter pseudonitzschiae.;"
hexapaptide repeat-containing transferase
anamox2_curated_scaffold_118_5
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6995..7285
DNA (291bp) protein (97aa)
Antibiotic biosynthesis monooxygenase Tax=Cupriavidus sp. HMR-1 RepID=L2EC82_9BURK
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ETR78058.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
antibiotic biosynthesis monooxygenase
anamox2_curated_scaffold_118_6
Pseudomonas sp. HPB0071, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7346..7750
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Pseudomonas sp. HPB0071 RepID=N2JII1_9PSED
Uncharacterized protein {ECO:0000313|EMBL:ENA35826.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. HPB0071.;"
hypothetical protein
anamox2_curated_scaffold_118_7
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7905..8117)
DNA (213bp) protein (71aa)
Uncharacterized protein Tax=Limnobacter sp. MED105 RepID=A6GPN1_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
anamox2_curated_scaffold_118_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8550..10163
DNA (1614bp) protein (538aa)
RNA helicase Tax=Thiobacillus denitrificans RepID=UPI0003630CE4
DEAD/DEAH box helicase
DEAD/DEAH box helicase {ECO:0000313|EMBL:AAZ98768.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
anamox2_curated_scaffold_118_9
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10230..10601
DNA (372bp) protein (124aa)
Glutaredoxin Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q223J5_RHOFD
glutaredoxin
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
anamox2_curated_scaffold_118_10
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10686..11864)
DNA (1179bp) protein (393aa)
peptidase M23 Tax=Maricaulis sp. JL2009 RepID=UPI00039D370C
Uncharacterized protein {ECO:0000313|EMBL:KJB94640.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
peptidase
anamox2_curated_scaffold_118_11
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11872..12798)
DNA (927bp) protein (309aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase Tax=Lautropia mirabilis ATCC 51599 RepID=E7RTU8_9BURK
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
anamox2_curated_scaffold_118_12
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12798..13253)
DNA (456bp) protein (152aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
fkpB; peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase Tax=Lautropia mirabilis ATCC 51599 RepID=E7RTU7_9BURK
anamox2_curated_scaffold_118_13
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13353..14027
DNA (675bp) protein (225aa)
DNA repair protein Tax=Marinobacter santoriniensis NKSG1 RepID=M7CPN2_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:GAO33674.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
hypothetical protein
anamox2_curated_scaffold_118_14
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14242..14478
DNA (237bp) protein (79aa)
50S ribosomal protein L28 Tax=Ralstonia RepID=RL28_RALSO
rpmB; 50S ribosomal protein L28
Tax=CG_Hydro_01
anamox2_curated_scaffold_118_15
Burkholderia thailandensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14529..14696
DNA (168bp) protein (56aa)
50S ribosomal protein L33 Tax=Duganella zoogloeoides RepID=UPI0003769A0F
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia thailandensis.;"
anamox2_curated_scaffold_118_16
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14885..16165
DNA (1281bp) protein (427aa)
hypothetical protein Tax=Thiobacillus denitrificans RepID=UPI00037A5799
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:GAD23385.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
mechanosensitive ion channel protein MscS
anamox2_curated_scaffold_118_17
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16260..17450)
DNA (1191bp) protein (397aa)
Fatty acid desaturase Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WBS3_BURSC
Aminotransferase {ECO:0000313|EMBL:KIF80468.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
fatty acid desaturase
anamox2_curated_scaffold_118_18
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17642..18886)
DNA (1245bp) protein (415aa)
hypothetical protein Tax=Thiomonas sp. FB-6 RepID=UPI0003734C2F
Fmu (Sun)/nucleolar NOL1/Nop2p
Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p {ECO:0000313|EMBL:AAZ47889.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
anamox2_curated_scaffold_118_19
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18922..19680)
DNA (759bp) protein (253aa)
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
Phosphoribosylglycinamide formyltransferase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJ53_METPP
anamox2_curated_scaffold_118_20
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19682..20647
DNA (966bp) protein (322aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
ribF; riboflavin biosynthesis protein RibF (EC:2.7.1.26 2.7.7.2)
Riboflavin kinase Tax=Cupriavidus sp. HPC(L) RepID=V2JDM7_9BURK
anamox2_curated_scaffold_118_21
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20780..23626
DNA (2847bp) protein (949aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
isoleucyl-tRNA synthetase Tax=Herbaspirillum sp. JC206 RepID=UPI0002ED6E38
anamox2_curated_scaffold_118_22
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23658..24152
DNA (495bp) protein (165aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain Po82).;"
Lipoprotein signal peptidase Tax=Ralstonia solanacearum (strain Po82) RepID=F6FZK1_RALS8
lspA; prolipoprotein signal peptidase (spase II)
anamox2_curated_scaffold_118_23
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24172..25374
DNA (1203bp) protein (401aa)
dfp; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:4.1.1.36 6.3.2.5)
Fused 4'-phosphopantothenoylcysteine decarboxylase {ECO:0000313|EMBL:ABF09760.1}; EC=4.1.1.36 {ECO:0000313|EMBL:ABF09760.1};; EC=6.3.2.5 {ECO:0000313|EMBL:ABF09760.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
Fused 4'-phosphopantothenoylcysteine decarboxylase Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LJB6_RALME
anamox2_curated_scaffold_118_24
unknown

Not on your lists

25492..25989
DNA (498bp) protein (166aa)

This feature has no annotations

anamox2_curated_scaffold_118_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25986..26432
DNA (447bp) protein (149aa)
dut; deoxyuridinetriphosphatase (dUTP diphosphatase) (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
anamox2_curated_scaffold_118_26
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26446..27381)
DNA (936bp) protein (312aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
talB; transaldolase (EC:2.2.1.2)
Transaldolase Tax=Herbaspirillum sp. YR522 RepID=J2W5X9_9BURK
anamox2_curated_scaffold_118_27
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27564..28622
DNA (1059bp) protein (353aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
dTDP-glucose 4,6-dehydratase Tax=Thauera sp. 28 RepID=N6ZKD8_9RHOO
rmlB; dTDP-D-glucose 4,6-dehydratase
anamox2_curated_scaffold_118_28
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28624..29499
DNA (876bp) protein (292aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
Glucose-1-phosphate thymidylyltransferase Tax=Thauera sp. 27 RepID=N6YH84_9RHOO
rmlA; glucose-1-phosphate thymidylyltransferase
anamox2_curated_scaffold_118_29
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29540..30088
DNA (549bp) protein (183aa)
dTDP-4-dehydrorhamnose 3,5-epimerase Tax=Methyloversatilis universalis RepID=UPI00035F6E3F
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:KGO33827.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase
anamox2_curated_scaffold_118_30
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30085..30987
DNA (903bp) protein (301aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MI45_PSEPS
Tax=CG_Beta_01
Displaying items 1-30 of 117 in total

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