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anamox2_curated_scaffold_25

Search features with annotation key words

Displaying items 1-30 of 172 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_25_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..783
DNA (783bp) protein (261aa)
Peptidase m20 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
peptidase-like protein
Tax=GWE1_Burkholderiales_65_30_curated
anamox2_curated_scaffold_25_2
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

857..1951
DNA (1095bp) protein (365aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase Tax=Thauera RepID=C4ZJY7_THASP
Tax=RBG_16_Betaproteobacteria_66_20_curated
anamox2_curated_scaffold_25_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2052..3395)
DNA (1344bp) protein (448aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-); K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
anamox2_curated_scaffold_25_4
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3633..4193)
DNA (561bp) protein (187aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein Tax=Thioalkalivibrio RepID=UPI00037157F1
2'-5' RNA ligase
anamox2_curated_scaffold_25_5
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4156..5616)
DNA (1461bp) protein (487aa)
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (EC:5.3.1.8)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI00031CA131
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:KIF81098.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
anamox2_curated_scaffold_25_6
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5716..6777
DNA (1062bp) protein (354aa)
UDP-glucose 4-epimerase/UDP-galactose 4-epimerase Tax=Methyloversatilis universalis FAM5 RepID=F5R991_9RHOO
UDP-glucose 4-epimerase/UDP-galactose 4-epimerase {ECO:0000313|EMBL:EGK72882.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
galE1; hypothetical protein
anamox2_curated_scaffold_25_7
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6761..7417)
DNA (657bp) protein (219aa)
deoxynucleoside kinase (EC:2.7.1.76)
Deoxyadenosine kinase Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1W3V4_9BURK
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
anamox2_curated_scaffold_25_8
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7414..7767)
DNA (354bp) protein (118aa)
Putative uncharacterized protein Tax=Acidovorax sp. NO-1 RepID=H0BY29_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL22480.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
anamox2_curated_scaffold_25_9
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7764..8312)
DNA (549bp) protein (183aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:EWS59389.1}; EC=2.7.6.3 {ECO:0000313|EMBL:EWS59389.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SK83_METPP
anamox2_curated_scaffold_25_10
Burkholderia thailandensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8327..9757)
DNA (1431bp) protein (477aa)
pcnB; poly(A) polymerase family protein (EC:2.7.7.19)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 /; CIP 106301).;"
Poly(A) polymerase I Tax=Burkholderia thailandensis RepID=Q2SYY8_BURTA
anamox2_curated_scaffold_25_11
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9754..10419)
DNA (666bp) protein (222aa)
Phosphoserine phosphatase Tax=Cupriavidus sp. HPC(L) RepID=V2J0J8_9BURK
Phosphoserine phosphatase {ECO:0000313|EMBL:ESJ20600.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
phosphoserine phosphatase
anamox2_curated_scaffold_25_12
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10439..11140)
DNA (702bp) protein (234aa)
DnaA regulatory inactivator Hda Tax=Ralstonia sp. AU12-08 RepID=S9TCY4_9RALS
DnaA regulatory inactivator Hda
DnaA regulatory inactivator Hda {ECO:0000313|EMBL:AJW46075.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
anamox2_curated_scaffold_25_13
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11137..12204)
DNA (1068bp) protein (356aa)
Putative permease transmembrane transport protein (PerM) Tax=Ralstonia solanacearum CMR15 RepID=D8N7H0_RALSL
putative permease transmembrane transport protein (perM)
Putative permease transmembrane transport protein (PerM) {ECO:0000313|EMBL:CBJ36994.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CMR15.;"
anamox2_curated_scaffold_25_14
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12359..13405
DNA (1047bp) protein (349aa)
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
Phosphoribosylformylglycinamidine cyclo-ligase Tax=Cupriavidus sp. HPC(L) RepID=V2K2C9_9BURK
anamox2_curated_scaffold_25_15
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13413..15209
DNA (1797bp) protein (599aa)
Outer membrane protein, OMP85 family Tax=Lautropia mirabilis ATCC 51599 RepID=E7RZ56_9BURK
Outer membrane protein, OMP85 family {ECO:0000313|EMBL:EFV93855.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
surface antigen family protein
anamox2_curated_scaffold_25_16
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15214..19353
DNA (4140bp) protein (1380aa)
Conserved hypothetical membrane protein Tax=Azoarcus sp. (strain BH72) RepID=A1KAT1_AZOSB
hypothetical protein
Conserved hypothetical membrane protein {ECO:0000313|EMBL:CAL95937.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
anamox2_curated_scaffold_25_17
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19332..20297)
DNA (966bp) protein (322aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000255|HAMAP-Rule:MF_00185}; EC=2.5.1.75 {ECO:0000255|HAMAP-Rule:MF_00185};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000255|HAMAP-Rule:MF_00185}; Short=DMAPP:tRNA dimethylallyltransferase {ECO:0000255|HAMAP-Rule:MF_00185};; Short=DMATase {ECO:0000255|HAMAP-Rule:MF_00185};; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000255|HAMAP-Rule:MF_00185}; Short=IPP transferase {ECO:0000255|HAMAP-Rule:MF_00185};; Short=IPPT {ECO:0000255|HAMAP-Rule:MF_00185};; Short=IPTase {ECO:0000255|HAMAP-Rule:MF_00185};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain 668).;"
tRNA dimethylallyltransferase Tax=Burkholderia pseudomallei (strain 668) RepID=MIAA_BURP6
anamox2_curated_scaffold_25_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20294..22147)
DNA (1854bp) protein (618aa)
gamma-glutamyltransferase (EC:2.3.2.2)
gamma-glutamyltransferase Tax=Verminephrobacter aporrectodeae RepID=UPI0002377DD5
Tax=RBG_16_Betaproteobacteria_64_18_curated
anamox2_curated_scaffold_25_19
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22147..24048)
DNA (1902bp) protein (634aa)
DNA mismatch repair protein MutL Tax=Ralstonia solanacearum K60-1 RepID=H5WFA7_RALSL
mutL; DNA mismatch repair protein
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
anamox2_curated_scaffold_25_20
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24179..24835
DNA (657bp) protein (219aa)
SNARE-like domain protein Tax=Lautropia mirabilis ATCC 51599 RepID=E7RXX5_9BURK
SNARE-like domain protein {ECO:0000313|EMBL:EFV94799.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
hypothetical protein
anamox2_curated_scaffold_25_21
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24842..26131)
DNA (1290bp) protein (430aa)
Cell wall hydrolase/autolysin Tax=Alicycliphilus denitrificans RepID=E8U234_ALIDB
cell wall hydrolase/autolysin
Cell wall hydrolase {ECO:0000313|EMBL:GAO26938.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
anamox2_curated_scaffold_25_22
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26173..26727)
DNA (555bp) protein (185aa)
Hydrolase, P-loop family Tax=Lautropia mirabilis ATCC 51599 RepID=E7RXW2_9BURK
Hydrolase, P-loop family {ECO:0000313|EMBL:EFV94786.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
hypothetical protein
anamox2_curated_scaffold_25_23
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26777..27868
DNA (1092bp) protein (364aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
Epoxyqueuosine reductase Tax=Thauera sp. 63 RepID=N6YBT5_9RHOO
electron transport protein
anamox2_curated_scaffold_25_24
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27850..28077)
DNA (228bp) protein (76aa)
hypothetical protein Tax=Thiobacillus denitrificans RepID=UPI000376307A
Uncharacterized protein {ECO:0000313|EMBL:KIF81437.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein
anamox2_curated_scaffold_25_25
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28100..28783)
DNA (684bp) protein (228aa)
hypothetical protein Tax=Leeia oryzae RepID=UPI00037C85EA
Crp/Fnr family transcriptional regulator
Tax=GWA2_Rhodocyclales_65_20_curated
anamox2_curated_scaffold_25_26
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28916..29614
DNA (699bp) protein (233aa)
Putative regulatory protein Tax=Herminiimonas arsenicoxydans RepID=A4G5Q4_HERAR
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KIF81435.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
cyclic nucleotide-binding domain-containing protein
anamox2_curated_scaffold_25_27
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29665..30060
DNA (396bp) protein (132aa)
hypothetical protein Tax=Uliginosibacterium gangwonense RepID=UPI000360B148
SirB protein {ECO:0000313|EMBL:KIG09173.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MR1.;"
invasion gene expression up-regulator, SirB
anamox2_curated_scaffold_25_28
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29993..31495)
DNA (1503bp) protein (501aa)
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
anamox2_curated_scaffold_25_29
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31492..31809)
DNA (318bp) protein (106aa)
Cytochrome C class I Tax=Thauera sp. 63 RepID=N6Y555_9RHOO
Cytochrome C class I {ECO:0000313|EMBL:ENO75164.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
cytochrome C transmembrane protein
anamox2_curated_scaffold_25_30
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31838..33559)
DNA (1722bp) protein (574aa)
Nitrite reductase {ECO:0000313|EMBL:KFB75449.1}; EC=1.7.2.1 {ECO:0000313|EMBL:KFB75449.1};; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
hydroxylamine reductase (EC:1.7.99.1)
Putative cytochrome cd1 nitrite reductase NirS Tax=uncultured bacterium 2303 RepID=B8R915_9BACT
Displaying items 1-30 of 172 in total

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