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anamox2_curated_scaffold_28

Search features with annotation key words

Displaying items 1-30 of 176 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_28_1
unknown

Not on your lists

1..93
DNA (93bp) protein (31aa)

This feature has no annotations

anamox2_curated_scaffold_28_2
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(591..1487)
DNA (897bp) protein (299aa)
RNA polymerase sigma factor RpoH Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q476H6_CUPPJ
RNA polymerase factor sigma-32
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
anamox2_curated_scaffold_28_3
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1670..2596)
DNA (927bp) protein (309aa)
Signal recognition particle receptor FtsY Tax=Lautropia mirabilis ATCC 51599 RepID=E7S0E7_9BURK
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
ftsY; signal recognition particle receptor FtsY
anamox2_curated_scaffold_28_4
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3091..4731
DNA (1641bp) protein (547aa)
Peptidase M16 Tax=Pandoraea pnomenusa 3kgm RepID=V5PW78_9BURK
peptidase M16
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
anamox2_curated_scaffold_28_5
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4768..6165
DNA (1398bp) protein (466aa)
zinc protease (EC:3.4.24.-)
Putative ZINC PROTEASE, peptidase M16 family {ECO:0000313|EMBL:CAP62980.1}; EC=3.4.24.- {ECO:0000313|EMBL:CAP62980.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
zinc protease Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00036323EC
anamox2_curated_scaffold_28_6
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6168..6812
DNA (645bp) protein (215aa)
16S rRNA (Guanine(966)-N(2))-methyltransferase RsmD {ECO:0000313|EMBL:AJX77793.1}; EC=2.1.1.171 {ECO:0000313|EMBL:AJX77793.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei MSHR2543.;"
methyltransferase Tax=Burkholderia pseudomallei RepID=UPI00016AF8B9
methyltransferase
anamox2_curated_scaffold_28_7
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6806..7297
DNA (492bp) protein (164aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000255|HAMAP-Rule:MF_00151}; EC=2.7.7.3 {ECO:0000255|HAMAP-Rule:MF_00151};; Dephospho-CoA pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000255|HAMAP-Rule:MF_00151}; Short=PPAT {ECO:0000255|HAMAP-Rule:MF_00151};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
hypothetical protein Tax=Uliginosibacterium gangwonense RepID=UPI00035C7031
anamox2_curated_scaffold_28_8
Burkholderia oklahomensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7342..7671
DNA (330bp) protein (110aa)
4Fe-4S dicluster domain protein Tax=Burkholderia thailandensis MSMB121 RepID=N0ABT2_BURTH
4Fe-4S dicluster domain protein
4Fe-4S dicluster domain protein {ECO:0000313|EMBL:AIO67159.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia oklahomensis.;"
anamox2_curated_scaffold_28_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7636..10350)
DNA (2715bp) protein (905aa)
glycerol-3-phosphate acyltransferase (EC:2.3.1.15)
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00393}; Short=GPAT {ECO:0000256|HAMAP-Rule:MF_00393};; EC=2.3.1.15 {ECO:0000256|HAMAP-Rule:MF_00393};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Glycerol-3-phosphate acyltransferase Tax=Rhodanobacter denitrificans RepID=M4NT07_9GAMM
anamox2_curated_scaffold_28_10
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10353..11852)
DNA (1500bp) protein (500aa)
Ppx/GppA phosphatase (EC:3.6.1.40)
Exopolyphosphatase (ExopolyPase) (Metaphosphatase) {ECO:0000313|EMBL:EED98516.1}; EC=3.6.1.11 {ECO:0000313|EMBL:EED98516.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CGD1.;"
Exopolyphosphatase (ExopolyPase) (Metaphosphatase) Tax=Burkholderia multivorans RepID=B9BB74_9BURK
anamox2_curated_scaffold_28_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12035..13339)
DNA (1305bp) protein (435aa)
Major facilitator superfamily MFS_1 Tax=Burkholderia RepID=A9AU88_BURM1
Permease of the major facilitator superfamily {ECO:0000313|EMBL:GAO22446.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
major facilitator transporter
anamox2_curated_scaffold_28_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13336..13962)
DNA (627bp) protein (209aa)
Putative metal-dependent enzyme of the double-stranded beta helix superfamily Tax=Caulobacter sp. AP07 RepID=J2FWY5_9CAUL
cysteine dioxygenase type I
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
anamox2_curated_scaffold_28_13
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14150..14914)
DNA (765bp) protein (255aa)
enoyl-CoA hydratase (EC:4.2.1.17)
enoyl-CoA hydratase Tax=Streptomyces rapamycinicus RepID=UPI00038312EA
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:CDR17962.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
anamox2_curated_scaffold_28_14
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15038..15814)
DNA (777bp) protein (259aa)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases)-like protein Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZQ8_RAMTT
dehydrogenase-like protein
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases)-like protein {ECO:0000313|EMBL:AEG92087.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
anamox2_curated_scaffold_28_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16062..17309
DNA (1248bp) protein (416aa)
AAA+ family ATPase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRQ8_9BURK
AAA+ family ATPase {ECO:0000313|EMBL:EHR72838.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox2_curated_scaffold_28_16
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17312..17953
DNA (642bp) protein (214aa)
Lysine exporter protein LysE/YggA Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J4Y3_PSEUL
lysE type translocator family protein
LysE type translocator family protein {ECO:0000313|EMBL:CDG82509.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
anamox2_curated_scaffold_28_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(18026..20332)
DNA (2307bp) protein (769aa)
tonb-dependent hemoglobin/transferrin/lactoferrin family receptor; K02014 iron complex outermembrane recepter protein bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
tonb-dependent hemoglobin/transferrin/lactoferrin family receptor
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox2_curated_scaffold_28_18
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20471..21220
DNA (750bp) protein (250aa)
Acetoacetyl-CoA reductase Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JS22_BURVG
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:KHJ53898.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
acetoacetyl-CoA reductase
anamox2_curated_scaffold_28_19
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21338..22432)
DNA (1095bp) protein (365aa)
GTP-binding protein YchF Tax=Cupriavidus sp. WS RepID=UPI00037235E9
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
ychF; GTP-binding protein YchF
anamox2_curated_scaffold_28_20
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22512..23783)
DNA (1272bp) protein (424aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
Acetate kinase Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J2R8_POLGS
tdcD; propionate kinase/acetate kinase C
anamox2_curated_scaffold_28_21
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24082..24999
DNA (918bp) protein (306aa)
5'-nucleotidase (EC:3.1.3.5)
5''''-nucleotidase Tax=Limnohabitans sp. Rim28 RepID=UPI0002E0B3CE
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
anamox2_curated_scaffold_28_22
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25070..26242)
DNA (1173bp) protein (391aa)
Putative acyltransferase Tax=Acidovorax sp. CF316 RepID=J0UEL2_9BURK
Putative acyltransferase {ECO:0000313|EMBL:EJE54542.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
acyltransferase 3
anamox2_curated_scaffold_28_23
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26245..26844)
DNA (600bp) protein (200aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
peptidyl-tRNA hydrolase Tax=Janthinobacterium lividum RepID=UPI0002886A53
peptidyl-tRNA hydrolase
anamox2_curated_scaffold_28_24
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(26932..27528)
DNA (597bp) protein (199aa)
50S ribosomal protein L25 Tax=Burkholderia kururiensis RepID=UPI00034B55CE
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00147491}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023359}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
ribosomal protein L25, Ctc-form
anamox2_curated_scaffold_28_25
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27626..28609)
DNA (984bp) protein (328aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase Tax=Limnobacter sp. MED105 RepID=A6GM59_9BURK
anamox2_curated_scaffold_28_trna_3
unknown

Not on your lists

comp(28673..28754)
DNA (82bp)
transferRNA Gln
anamox2_curated_scaffold_28_26
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28760..29683)
DNA (924bp) protein (308aa)
ipk; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase Tax=Azoarcus toluclasticus RepID=UPI0003607085
anamox2_curated_scaffold_28_27
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29680..30246)
DNA (567bp) protein (189aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI00030775BA
lolB; outer-membrane lipoprotein lolB lipoprotein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
anamox2_curated_scaffold_28_28
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30287..32245)
DNA (1959bp) protein (653aa)
Tetratricopeptide repeat protein Tax=Lautropia mirabilis ATCC 51599 RepID=E7S0P0_9BURK
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
anamox2_curated_scaffold_28_29
Burkholderia sp. CCGE1001, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32311..33132
DNA (822bp) protein (274aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. CCGE1001.;"
Formamidopyrimidine-DNA glycosylase Tax=Burkholderia sp. CCGE1001 RepID=E8YLX7_9BURK
Displaying items 1-30 of 176 in total

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