ggKbase home page

anamox2_curated_scaffold_623

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_623_1
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3..443)
DNA (441bp) protein (147aa)
30S ribosomal protein S1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RTM1_9BURK
Ribosomal protein S1 {ECO:0000313|EMBL:EFV96107.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
30S ribosomal protein S1
anamox2_curated_scaffold_623_2
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(453..1118)
DNA (666bp) protein (222aa)
cmk; cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase Tax=Sutterella sp. CAG:521 RepID=R7KV52_9BURK
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
anamox2_curated_scaffold_623_3
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1111..2430)
DNA (1320bp) protein (440aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000255|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000255|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00210}; Short=EPSP synthase {ECO:0000255|HAMAP-Rule:MF_00210};; Short=EPSPS {ECO:0000255|HAMAP-Rule:MF_00210};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
3-phosphoshikimate 1-carboxyvinyltransferase Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=AROA_ALKEH
anamox2_curated_scaffold_623_4
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2527..2916
DNA (390bp) protein (130aa)
Uncharacterized protein Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46RH6_CUPPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ64258.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
anamox2_curated_scaffold_623_5
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2959..3849)
DNA (891bp) protein (297aa)
Prephenate dehydrogenase Tax=Herbaspirillum sp. YR522 RepID=J2W415_9BURK
prephenate dehydrogenase
Prephenate dehydrogenase {ECO:0000313|EMBL:BAP89190.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
anamox2_curated_scaffold_623_6
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3846..4943)
DNA (1098bp) protein (366aa)
Histidinol-phosphate aminotransferase Tax=Cupriavidus sp. HPC(L) RepID=V2GCZ5_9BURK
histidinol-phosphate aminotransferase
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
anamox2_curated_scaffold_623_7
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4997..6103)
DNA (1107bp) protein (369aa)
pheA; bifunctional chorismate mutase/prephenate dehydratase (EC:4.2.1.51 5.4.99.5)
Bifunctional chorismate mutase / prephenate dehydratase {ECO:0000313|EMBL:ABR89033.1}; EC=4.2.1.51 {ECO:0000313|EMBL:ABR89033.1};; EC=5.4.99.5 {ECO:0000313|EMBL:ABR89033.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
chorismate mutase Tax=Herbaspirillum sp. JC206 RepID=UPI0002D5CF21
anamox2_curated_scaffold_623_8
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6180..8795)
DNA (2616bp) protein (872aa)
gyrA; DNA gyrase, A subunit (EC:5.99.1.3)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
DNA gyrase subunit A Tax=Burkholderia gladioli (strain BSR3) RepID=F2LC15_BURGS
anamox2_curated_scaffold_623_9
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9008..10354
DNA (1347bp) protein (449aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHV6_AZOSU
cytosine deaminase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
anamox2_curated_scaffold_623_10
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10408..11085
DNA (678bp) protein (226aa)
membrane protein Tax=Caldimonas manganoxidans RepID=UPI00036FE41E
Membrane protein {ECO:0000313|EMBL:KIF82898.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
OmpA/MotB domain-containing protein
anamox2_curated_scaffold_623_11
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11190..11921
DNA (732bp) protein (244aa)
ubiG; 3-demethylubiquinone-9 3-O-methyltransferase (EC:2.1.1.64)
Ubiquinone biosynthesis O-methyltransferase Tax=Achromobacter xylosoxidans AXX-A RepID=F7T3U4_ALCXX
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
anamox2_curated_scaffold_623_12
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11918..12610
DNA (693bp) protein (231aa)
h16_A0786; phosphatase (EC:3.1.3.-)
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
Putative 2-phosphoglycolate phosphatase Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R359_CUPTR
anamox2_curated_scaffold_623_13
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12853..13764
DNA (912bp) protein (304aa)
hypothetical protein Tax=Methyloversatilis sp. NVD RepID=UPI00035DBD7E
Uncharacterized protein {ECO:0000313|EMBL:EGJ08943.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox2_curated_scaffold_623_14
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13761..14240
DNA (480bp) protein (160aa)
hypothetical protein Tax=Methyloversatilis universalis RepID=UPI00037B2B55
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL93903.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox2_curated_scaffold_623_15
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14240..15502
DNA (1263bp) protein (421aa)
N-glycosyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HLL7_RUBGI
N-glycosyltransferase
N-glycosyltransferase {ECO:0000313|EMBL:BAL93904.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox2_curated_scaffold_623_16
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15499..17373
DNA (1875bp) protein (625aa)
TPR repeat-containing protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HLL8_RUBGI
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:BAL93905.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox2_curated_scaffold_623_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18028..19266
DNA (1239bp) protein (413aa)
integrase Tax=Arhodomonas aquaeolei RepID=UPI0003616979
Phage integrase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
anamox2_curated_scaffold_623_18
unknown

Not on your lists

19406..20128
DNA (723bp) protein (241aa)

This feature has no annotations

anamox2_curated_scaffold_623_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20256..20522
DNA (267bp) protein (89aa)
Phage regulatory protein, AlpA family Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AF07_GEOSK
phage regulatory protein, AlpA family
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
anamox2_curated_scaffold_623_20
unknown

Not on your lists

20824..21054
DNA (231bp) protein (77aa)

This feature has no annotations

anamox2_curated_scaffold_623_21
unknown

Not on your lists

21051..21227
DNA (177bp) protein (59aa)

This feature has no annotations

anamox2_curated_scaffold_623_22
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21296..21520
DNA (225bp) protein (75aa)
hypothetical protein Tax=Curvibacter lanceolatus RepID=UPI00035E6B1B
Uncharacterized protein {ECO:0000313|EMBL:EXU78825.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
hypothetical protein
anamox2_curated_scaffold_623_23
unknown

Not on your lists

21517..21804
DNA (288bp) protein (96aa)

This feature has no annotations

anamox2_curated_scaffold_623_24
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21815..24823
DNA (3009bp) protein (1003aa)
DNA/RNA helicase, superfamily II Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y9A5_THIV6
DNA/RNA helicase
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:AFL73573.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
anamox2_curated_scaffold_623_25
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24813..25370
DNA (558bp) protein (186aa)
Uncharacterized protein {ECO:0000313|EMBL:KIN92212.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
anamox2_curated_scaffold_623_26
Acinetobacter sp. CIP 70.18, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25292..34120)
DNA (8829bp) protein (2943aa)
Uncharacterized protein Tax=Acinetobacter sp. CIP 70.18 RepID=N9RI36_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENX57663.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. CIP 70.18.;"
helicase domain-containing protein
anamox2_curated_scaffold_623_27
unknown

Not on your lists

34321..34881
DNA (561bp) protein (187aa)

This feature has no annotations

anamox2_curated_scaffold_623_28
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35591..35923
DNA (333bp) protein (111aa)
Uncharacterized protein Tax=Thauera terpenica 58Eu RepID=S9ZEG3_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ15640.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
anamox2_curated_scaffold_623_29
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35923..36279
DNA (357bp) protein (119aa)
ISPpu15, transposase Orf1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IBU1_BORPD
ISPpu15, transposase Orf1
ISPpu15, transposase Orf1 {ECO:0000313|EMBL:CAP41483.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
anamox2_curated_scaffold_623_30
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36405..38105
DNA (1701bp) protein (567aa)
Transposase IS66 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JIZ2_BURVG
transposase IS66
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
Displaying items 1-30 of 31 in total

View Taxonomy