ggKbase home page

anamox2_curated_scaffold_2725

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_2725_1
unknown

Not on your lists

comp(174..344)
DNA (171bp) protein (57aa)

This feature has no annotations

anamox2_curated_scaffold_2725_2
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(1009..1959)
DNA (951bp) protein (317aa)
atm:ANT_02800 engC; GTPase EngC (EC:3.6.1.-); K06949 ribosome biogenesis GTPase [EC:3.6.1.-] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ribosome small subunit-dependent GTPase A
Tax=RBG_16_Chloroflexi_63_12_curated
anamox2_curated_scaffold_2725_3
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(2101..3078)
DNA (978bp) protein (326aa)
Electron transfer flavoprotein alpha subunit bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
electron transfer flavoprotein subunit alpha/beta
Tax=RBG_16_Chloroflexi_63_12_curated
anamox2_curated_scaffold_2725_4
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(3075..3869)
DNA (795bp) protein (265aa)
electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Electron transfer flavoprotein alpha/beta-subunit
Tax=RBG_16_Chloroflexi_63_12_curated
anamox2_curated_scaffold_2725_5
unknown

Not on your lists

comp(3932..4525)
DNA (594bp) protein (198aa)

This feature has no annotations

anamox2_curated_scaffold_2725_6
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

4817..5551
DNA (735bp) protein (245aa)
Uncharacterized protein Tax=Sphingomonas sp. MM-1 RepID=M4S712_9SPHN
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
anamox2_curated_scaffold_2725_7
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

5655..6863
DNA (1209bp) protein (403aa)
Putative acyl-CoA dehydrogenase short-chain specific Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I049_CALAS
putative acyl-CoA dehydrogenase short-chain specific
Putative acyl-CoA dehydrogenase short-chain specific {ECO:0000313|EMBL:BAL98636.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
anamox2_curated_scaffold_2725_8
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

6967..7545
DNA (579bp) protein (193aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036AA1A9
hypothetical protein
Tax=CG_Anaero_02
anamox2_curated_scaffold_2725_9
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

7532..7822
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZ68_CALAS
hypothetical protein
Tax=CG_Anaero_02
anamox2_curated_scaffold_2725_10
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

7819..8007
DNA (189bp) protein (63aa)
hypothetical protein Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B3AFD0
hypothetical protein
Tax=CG_Anaero_02
anamox2_curated_scaffold_2725_11
Desulfonatronum thiodismutans, Desulfonatronum, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8116..11013
DNA (2898bp) protein (966aa)
ATP-dependent DNA helicase RecQ Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B64407
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:AIE18283.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfonatronumaceae; Desulfonatronum.;" source="Desulfonatronum thiodismutans.;"
recQ; ATP-dependent DNA helicase RecQ
anamox2_curated_scaffold_2725_12
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(11006..12166)
DNA (1161bp) protein (387aa)
rrs:RoseRS_3808 FAD dependent oxidoreductase; K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
FAD dependent oxidoreductase
Tax=RBG_16_Chloroflexi_54_18_curated
anamox2_curated_scaffold_2725_13

Not on your lists

comp(12163..13158)
DNA (996bp) protein (332aa)
rca:Rcas_3909 ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ornithine cyclodeaminase (EC:4.3.1.12)
Uncharacterized protein {ECO:0000313|EMBL:KKN36953.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
anamox2_curated_scaffold_2725_14
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(13315..14028)
DNA (714bp) protein (238aa)
ABC transporter related protein bin=GWB2_Chloroflexi_49_20 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
ABC transporter
Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
anamox2_curated_scaffold_2725_15
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(14025..14840)
DNA (816bp) protein (272aa)
cap:CLDAP_29810 putative branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ABC transporter-like protein
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
anamox2_curated_scaffold_2725_16
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(14851..16548)
DNA (1698bp) protein (566aa)
tro:trd_A0636 leucine/isoleucine/valine transporter permease subunit; K01998 branched-chain amino acid transport system permease protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
leucine/isoleucine/valine transporter permease subunit
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
anamox2_curated_scaffold_2725_17
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(16561..17637)
DNA (1077bp) protein (359aa)
tro:trd_A0635 inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
inner-membrane translocator
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
anamox2_curated_scaffold_2725_18
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(17803..19098)
DNA (1296bp) protein (432aa)
tro:trd_A0634 branched-chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
branched-chain amino acid ABC transporter substrate-binding protein
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
anamox2_curated_scaffold_2725_19
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19344..19862)
DNA (519bp) protein (173aa)
Similar to phoU bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
phosphate uptake regulator PhoU
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
anamox2_curated_scaffold_2725_20

Not on your lists

comp(20063..20806)
DNA (744bp) protein (248aa)
Marine sediment metagenome DNA, contig: S01H1_S20451 {ECO:0000313|EMBL:GAG16226.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
anamox2_curated_scaffold_2725_21
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(20889..22163)
DNA (1275bp) protein (425aa)
beta-ketoacyl synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
3-oxoacyl-(acyl-carrier-protein) synthase 2
Tax=RBG_16_Chloroflexi_63_12_curated
anamox2_curated_scaffold_2725_22
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(22263..23252)
DNA (990bp) protein (330aa)
atm:ANT_11730 plsX; fatty acid/phospholipid synthesis protein PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
plsX; fatty acid/phospholipid synthesis protein PlsX
Tax=RBG_16_Chloroflexi_48_8_curated
anamox2_curated_scaffold_2725_23
Xenococcus sp. PCC 7305, Xenococcus, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(23384..24340)
DNA (957bp) protein (319aa)
Putative membrane protein Tax=Xenococcus sp. PCC 7305 RepID=L8MCA2_9CYAN
Putative membrane protein {ECO:0000313|EMBL:ELS05235.1}; species="Bacteria; Cyanobacteria; Pleurocapsales; Xenococcus.;" source="Xenococcus sp. PCC 7305.;"
hypothetical protein
anamox2_curated_scaffold_2725_24
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(24382..24903)
DNA (522bp) protein (174aa)
cystathionine gamma-synthase (EC:2.5.1.48)
Cystathionine gamma-synthase {ECO:0000313|EMBL:ACZ39453.1}; EC=2.5.1.48 {ECO:0000313|EMBL:ACZ39453.1};; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Cystathionine gamma-synthase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5Q1_SPHTD
anamox2_curated_scaffold_2725_25
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(24881..25564)
DNA (684bp) protein (228aa)
Cystathionine gamma-lyase bin=GWB2_Chloroflexi_49_20 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
cystathionine gamma-synthase
Tax=RBG_16_Chloroflexi_52_11_curated
anamox2_curated_scaffold_2725_26
RBG_19FT_COMBO_Chloroflexi_49_13_curated, Chloroflexi, Bacteria

Not on your lists

comp(25693..26046)
DNA (354bp) protein (118aa)
Putative transposase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I5W1_CALAS
putative transposase
Tax=RBG_19FT_COMBO_Chloroflexi_49_13_curated
Displaying 26 items

View Taxonomy