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anamox2_curated_scaffold_3961

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_3961_1
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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688..3345
DNA (2658bp) protein (886aa)
ial:IALB_0163 valS; valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
valS; valyl-tRNA synthetase
anamox2_curated_scaffold_3961_2
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3585..4085
DNA (501bp) protein (167aa)
hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH47876.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox2_curated_scaffold_3961_3
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(4121..4954)
DNA (834bp) protein (278aa)
transmembrane_regions bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Tax=RBG_16_Ignavibacteria_34_14_curated
anamox2_curated_scaffold_3961_4
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(5124..6470)
DNA (1347bp) protein (449aa)
ial:IALB_0134 nrdD; Ribonucleoside-triphosphate reductase; K00876 uridine kinase [EC:2.7.1.48] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
nrdD; ribonucleoside-triphosphate reductase
Ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:AFH47846.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox2_curated_scaffold_3961_5
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(6617..8683)
DNA (2067bp) protein (689aa)
hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_35_7_curated
anamox2_curated_scaffold_3961_6
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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8864..10675
DNA (1812bp) protein (604aa)
ial:IALB_0133 hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=CG_Ignavi_02
anamox2_curated_scaffold_3961_7
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(10726..11415)
DNA (690bp) protein (230aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AP54_IGNAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH50761.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox2_curated_scaffold_3961_8
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(11774..12658)
DNA (885bp) protein (295aa)
Radical SAM domain protein bin=GWE2_Bacteroidetes_39_28 species=Clostridium cellulolyticum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
radical SAM protein
Tax=GWE2_Bacteroidetes_39_28_curated
anamox2_curated_scaffold_3961_9
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12664..13209)
DNA (546bp) protein (182aa)
Putative uncharacterized protein Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J0M9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK00622.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
anamox2_curated_scaffold_3961_10
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(13265..15454)
DNA (2190bp) protein (730aa)
ial:IALB_3151 hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Uncharacterized protein {ECO:0000313|EMBL:AFH50854.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
hypothetical protein
anamox2_curated_scaffold_3961_11
unknown

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15734..16909
DNA (1176bp) protein (392aa)

This feature has no annotations

anamox2_curated_scaffold_3961_12
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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17118..18200
DNA (1083bp) protein (361aa)
hypothetical protein Tax=Gracilimonas tropica RepID=UPI00036C9EF4
Tax=RBG_16_Ignavibacteria_36_9_curated
anamox2_curated_scaffold_3961_13
unknown

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18356..18631
DNA (276bp) protein (92aa)

This feature has no annotations

Displaying 13 items

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