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anamox2_curated_scaffold_4419

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_4419_1
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3..338)
DNA (336bp) protein (112aa)
Major facilitator transporter Tax=Flavobacterium sp. F52 RepID=J0RKE9_9FLAO
major facilitator transporter
Tax=RBG_16_Ignavibacteria_34_14_curated
anamox2_curated_scaffold_4419_2
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(411..1139)
DNA (729bp) protein (243aa)
narI; nitrate reductase subunit gamma (EC:1.7.99.4)
Nitrate reductase (Gamma subunit) bin=GWF2_Ignavibacteria_35_20 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
anamox2_curated_scaffold_4419_3
unknown

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comp(1149..1259)
DNA (111bp) protein (37aa)

This feature has no annotations

anamox2_curated_scaffold_4419_4
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1342..1791)
DNA (450bp) protein (150aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
narJ; protein necessary for nitrate reductase assembly (narJ)
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
anamox2_curated_scaffold_4419_5
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1798..3351)
DNA (1554bp) protein (518aa)
Nitrate reductase 1, beta (Fe-S) subunit bin=GWF2_Ignavibacteria_35_20 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
respiratory nitrate reductase subunit beta
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
anamox2_curated_scaffold_4419_6
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3537..3761)
DNA (225bp) protein (75aa)
Putative uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Nonlabens dokdonensis genus=Nonlabens taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
anamox2_curated_scaffold_4419_7
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(3765..7373)
DNA (3609bp) protein (1203aa)
Nitrate reductase (Alpha subunit) bin=GWF2_Ignavibacteria_35_20 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
narG-2; nitrate reductase Z subunit alpha
Tax=RBG_16_Ignavibacteria_35_7_curated
anamox2_curated_scaffold_4419_8
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7406..8398)
DNA (993bp) protein (331aa)
Putative Cytochrome c, class I bin=GWF2_Ignavibacteria_35_20 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
narC-2; respiratory nitrate reductase, cytochrome c
Tax=RBG_16_Ignavibacteria_35_7_curated
anamox2_curated_scaffold_4419_9
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

8656..9111
DNA (456bp) protein (152aa)
hypothetical membrane protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
cytochrome c oxidase subunit I
Tax=CG_Ignavi_01
anamox2_curated_scaffold_4419_10
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

9112..9813
DNA (702bp) protein (234aa)
SAM-dependent methyltransferase; K15256 tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
methylase
Tax=CG_Ignavi_02
anamox2_curated_scaffold_4419_11
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

9866..10096
DNA (231bp) protein (77aa)
Ferredoxin bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
4Fe-4S ferredoxin
Tax=CG_Ignavi_01
anamox2_curated_scaffold_4419_12
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

10139..11527
DNA (1389bp) protein (463aa)
Pyridine nucleotide-disulphide oxidoreductase Tax=planctomycete KSU-1 RepID=I3IK42_9PLAN
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=CG_Ignavi_01
anamox2_curated_scaffold_4419_13
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11747..12052
DNA (306bp) protein (102aa)
RmlC-like cupin family protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
cupin 2 barrel domain-containing protein
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:AEM71670.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;"
anamox2_curated_scaffold_4419_14
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12068..12793
DNA (726bp) protein (242aa)
lby:Lbys_0339 iron-sulfur cluster repair di-iron protein; K07322 regulator of cell morphogenesis and NO signaling bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
iron-sulfur cluster repair di-iron protein
Iron-sulfur cluster repair di-iron protein {ECO:0000313|EMBL:AEA45164.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
anamox2_curated_scaffold_4419_15
Psychroflexus gondwanensis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12810..14225
DNA (1416bp) protein (472aa)
mtt:Ftrac_2723 cytochrome-c oxidase (EC:1.9.3.1); K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
cytochrome-c oxidase (EC:1.9.3.1)
Cbb3-type cytochrome c oxidase subunit I {ECO:0000313|EMBL:EMY80525.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychroflexus gondwanensis ACAM 44.;"
anamox2_curated_scaffold_4419_16
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14222..15193
DNA (972bp) protein (324aa)
Cytochrome C oxidase mono-heme subunit/FixO Tax=Hyphomicrobium denitrificans 1NES1 RepID=G4ITM4_9RHIZ bin=RAAC39 species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RAAC39 organism_group=Ignavibacteria
Cbb3-type cytochrome oxidase, cytochrome c subunit
Cbb3-type cytochrome oxidase, cytochrome c subunit {ECO:0000313|EMBL:AGK58646.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
anamox2_curated_scaffold_4419_17
unknown

Not on your lists

15196..15429
DNA (234bp) protein (78aa)
transmembrane_regions bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
anamox2_curated_scaffold_4419_18
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15435..16247
DNA (813bp) protein (271aa)
Uncharacterized protein Tax=Bradyrhizobium sp. WSM1253 RepID=I2QVC3_9BRAD bin=RAAC39 species=Bradyrhizobium sp. WSM1253 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RAAC39 organism_group=Ignavibacteria
Uncharacterized protein {ECO:0000313|EMBL:ETW97330.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
cytochrome c class I
anamox2_curated_scaffold_4419_19
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

16443..16697
DNA (255bp) protein (85aa)
Peroxiredoxin osmC bin=GWC2_CP_Nitrospirae-rel_42_7 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
OsmC family protein
Tax=RBG_16_Zixibacteria_53_22_curated
anamox2_curated_scaffold_4419_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17299..19167
DNA (1869bp) protein (623aa)
mfu:LILAB_15100 chloride channel bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Chloride channel {ECO:0000313|EMBL:EIL93437.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
chloride channel
anamox2_curated_scaffold_4419_21
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

19514..19897
DNA (384bp) protein (128aa)
hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Cupin domain
Cupin domain {ECO:0000313|EMBL:AHY45851.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
anamox2_curated_scaffold_4419_22
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20038..20997
DNA (960bp) protein (320aa)
CDP-alcohol phosphatidyltransferase Tax=Flavobacterium frigoris PS1 RepID=H7FSJ5_9FLAO
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:KFC60678.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
CDP-alcohol phosphatidyltransferase
anamox2_curated_scaffold_4419_23
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21025..23850
DNA (2826bp) protein (942aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
Aconitate hydratase 1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G5F0_ECHVK
aconitate hydratase 1
anamox2_curated_scaffold_4419_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23873..24331
DNA (459bp) protein (153aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Alkylhydroperoxidase like protein, AhpD family Tax=Rhodanobacter RepID=G4FVM8_9GAMM bin=RAAC39 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RAAC39 organism_group=Ignavibacteria
alkylhydroperoxidase AhpD family core domain protein
anamox2_curated_scaffold_4419_25
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24404..25075
DNA (672bp) protein (224aa)
Ferredoxin reductase Tax=Flavobacterium frigoris PS1 RepID=H7FQT1_9FLAO bin=RAAC39 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=RAAC39 organism_group=Ignavibacteria
Ferredoxin reductase {ECO:0000313|EMBL:EIA09211.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
flavodoxin reductase family protein
anamox2_curated_scaffold_4419_26
unknown

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25174..25245
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 26 items

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