ggKbase home page

anamox2_curated_scaffold_1628

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox2_curated_scaffold_1628_1
unknown

Not on your lists

comp(95..403)
DNA (309bp) protein (103aa)

This feature has no annotations

anamox2_curated_scaffold_1628_2
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(512..1267)
DNA (756bp) protein (252aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037E8826
Metal-dependent hydrolase {ECO:0000313|EMBL:GAN45092.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
metal-dependent hydrolase
anamox2_curated_scaffold_1628_3
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1298..2215)
DNA (918bp) protein (306aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000364BDBF
Recombination-associated protein RdgC {ECO:0000256|HAMAP-Rule:MF_00194, ECO:0000256|SAAS:SAAS00073315}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
recombinase RdgC
anamox2_curated_scaffold_1628_4
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2328..3197)
DNA (870bp) protein (290aa)
tRNA 2-thiocytidine biosynthesis protein TtcA Tax=Dyella ginsengisoli RepID=UPI00037A9704
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000313|EMBL:GAN45861.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
tRNA 2-thiocytidine biosynthesis protein TtcA
anamox2_curated_scaffold_1628_5
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3424..5424
DNA (2001bp) protein (667aa)
transketolase (EC:2.2.1.1)
Transketolase {ECO:0000313|EMBL:AKC68373.1}; EC=2.2.1.1 {ECO:0000313|EMBL:AKC68373.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
Transketolase Tax=Pandoraea RepID=V5UDC7_9BURK
anamox2_curated_scaffold_1628_6
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5505..5711
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN45862.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Putative uncharacterized protein bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
uncharacterized conserved small protein containing a coiled-coil domain
anamox2_curated_scaffold_1628_7
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5730..6278
DNA (549bp) protein (183aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RSM2_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV35924.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
anamox2_curated_scaffold_1628_8
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6303..8822)
DNA (2520bp) protein (840aa)
UPI0003CF4EC1 related cluster Tax=unknown RepID=UPI0003CF4EC1
Copper-transporting P-type ATPase {ECO:0000313|EMBL:ESW87033.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
heavy metal translocating P-type ATPase
anamox2_curated_scaffold_1628_9
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8819..9229)
DNA (411bp) protein (137aa)
Transcriptional regulator, MerR family Tax=mine drainage metagenome RepID=T1A694_9ZZZZ
MerR family transcriptional regulator {ECO:0000313|EMBL:KGI77875.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
MerR family transcriptional regulator
anamox2_curated_scaffold_1628_10
unknown

Not on your lists

9361..9660
DNA (300bp) protein (100aa)

This feature has no annotations

anamox2_curated_scaffold_1628_11
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(9680..9967)
DNA (288bp) protein (96aa)
Uncharacterized conserved protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKU2_CHLTF
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:AEP13297.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
anamox2_curated_scaffold_1628_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9986..10759
DNA (774bp) protein (258aa)
Exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III Tax=Rhodanobacter fulvus Jip2 RepID=I4VLU1_9GAMM
Exodeoxyribonuclease III {ECO:0000313|EMBL:EIL88182.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
anamox2_curated_scaffold_1628_13
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10749..11405
DNA (657bp) protein (219aa)
YecA family protein Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC33_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45122.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
anamox2_curated_scaffold_1628_14
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11560..12417
DNA (858bp) protein (286aa)
Putative pirin-related protein Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2U8X6_XANAP
Uncharacterized protein {ECO:0000313|EMBL:KGI79192.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
pirin
anamox2_curated_scaffold_1628_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12446..12877)
DNA (432bp) protein (144aa)
Integral membrane protein Tax=Rhodanobacter fulvus Jip2 RepID=I4VPW7_9GAMM
Integral membrane protein {ECO:0000313|EMBL:EIL89258.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
membrane protein
anamox2_curated_scaffold_1628_16
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12970..14874)
DNA (1905bp) protein (635aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037754D1
Peptidase S9 {ECO:0000313|EMBL:GAN45124.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
peptidase S9
anamox2_curated_scaffold_1628_17
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15195..15983)
DNA (789bp) protein (263aa)
Uncharacterized protein Tax=Rhodanobacter spathiphylli B39 RepID=I4VR03_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJV35359.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
anamox2_curated_scaffold_1628_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15980..16678)
DNA (699bp) protein (233aa)
thymidine kinase (EC:2.7.1.21)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Thymidine kinase Tax=Rhodanobacter denitrificans RepID=I4WJM2_9GAMM
anamox2_curated_scaffold_1628_19
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17017..17916
DNA (900bp) protein (300aa)
membrane protein Tax=Nevskia ramosa RepID=UPI0003B31D89
Uncharacterized protein {ECO:0000313|EMBL:EIT72075.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
transmembrane protein
anamox2_curated_scaffold_1628_20
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17921..18403
DNA (483bp) protein (161aa)
putative nucleotide-binding protein bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas sacchari genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
UPF0234 protein N790_14195 {ECO:0000256|HAMAP-Rule:MF_00632}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
nucleotide-binding protein
anamox2_curated_scaffold_1628_21
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19267..20256)
DNA (990bp) protein (330aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM50981.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
anamox2_curated_scaffold_1628_22
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20901..22877
DNA (1977bp) protein (659aa)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00036EAC1F
ATP-dependent DNA helicase Rep
anamox2_curated_scaffold_1628_23
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22938..23888)
DNA (951bp) protein (317aa)
Putative permease Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCM3_9GAMM
Membrane protein {ECO:0000313|EMBL:KGI79104.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
putative permease
anamox2_curated_scaffold_1628_24
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24171..24551
DNA (381bp) protein (127aa)
Putative acid phosphatase Tax=Rhodanobacter sp. 115 RepID=I4W8R0_9GAMM
Acid phosphatase {ECO:0000313|EMBL:GAN45114.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
acid phosphatase
Displaying 24 items

View Taxonomy