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anamox3_curated_scaffold_3057

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_3057_1
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..682
DNA (681bp) protein (227aa)
Putative transcriptional regulator Tax=Geobacter sp. (strain M21) RepID=C6E2D2_GEOSM
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ACT17078.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
anamox3_curated_scaffold_3057_2
unknown

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691..906
DNA (216bp) protein (72aa)

This feature has no annotations

anamox3_curated_scaffold_3057_3
Nonlabens sediminis, Nonlabens, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(943..2373)
DNA (1431bp) protein (477aa)
Integrase Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GM33_9SPHI
Integrase {ECO:0000313|EMBL:GAK95527.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Nonlabens.;" source="Nonlabens sediminis.;"
integrase family protein
anamox3_curated_scaffold_3057_trna_1
unknown

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comp(2545..2616)
DNA (72bp)
transferRNA Glu
anamox3_curated_scaffold_3057_4
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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2789..3406
DNA (618bp) protein (206aa)
Dephospho-CoA kinase bin=GWB2_Ignavibacteria_35_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
dephospho-CoA kinase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_3057_5
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3549..3872
DNA (324bp) protein (108aa)
thioredoxin; K03671 thioredoxin 1 bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
thioredoxin
anamox3_curated_scaffold_3057_6
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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3907..4209
DNA (303bp) protein (101aa)
transcriptional coactivator/pterin dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] bin=BACIGN_2 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=BACIGN_2 organism_group=Unknown_CP
Pterin-4a-carbinolamine dehydratase (EC:4.2.1.96)
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_3057_7
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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4253..5530
DNA (1278bp) protein (426aa)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] bin=BACIGN_2 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_3057_8
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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5619..7028
DNA (1410bp) protein (470aa)
Phosphoglucomutase (EC:5.4.2.2) bin=BACIGN_2 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
Phosphoglucomutase (EC:5.4.2.2)
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_3057_9
Alishewanella aestuarii, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7042..7575
DNA (534bp) protein (178aa)
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] bin=BACIGN_2 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EJI85768.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella aestuarii B11.;"
dTDP-4-dehydrorhamnose 3,5-epimerase
anamox3_curated_scaffold_3057_10
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(7565..8596)
DNA (1032bp) protein (344aa)
Erythronate-4-phosphate dehydrogenase bin=GWA2_Ignavibacteria-rel_35_8 species=Kangiella koreensis genus=Kangiella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
erythronate-4-phosphate dehydrogenase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_3057_11
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(8599..10242)
DNA (1644bp) protein (548aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
quinoprotein glucose dehydrogenase bin=BACIGN_2 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Tax=BJP_IG2069_Ignavibacteriae_38_11
Displaying 12 items

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