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anamox3_curated_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 253 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_12_1
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..1326)
DNA (1326bp) protein (442aa)
b-glycosidase (EC:3.2.1.-)
Uncharacterized protein {ECO:0000313|EMBL:KJS07586.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
CHU large protein; uncharacterized bin=GWE2_Bacteroidetes_42_42 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
anamox3_curated_scaffold_12_2
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1533..2147
DNA (615bp) protein (205aa)
Deoxyadenosine kinase (EC:2.7.1.76)
Deoxyadenosine kinase bin=GWF2_Bacteroidetes_38_335 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
Tax=GWF2_Bacteroidetes_38_335_curated
anamox3_curated_scaffold_12_3
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2164..3858)
DNA (1695bp) protein (565aa)
hypothetical protein Tax=Pontibacter roseus RepID=UPI000372B428
Sss sodium solute transporter superfamily protein {ECO:0000313|EMBL:AHM58575.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
sodium:solute symporter
anamox3_curated_scaffold_12_4
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4119..5654
DNA (1536bp) protein (512aa)
GH3 auxin-responsive promoter-binding protein Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KN61_SOLCM
GH3 auxin-responsive promoter-binding protein
GH3 auxin-responsive promoter-binding protein {ECO:0000313|EMBL:AFD09394.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
anamox3_curated_scaffold_12_5
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

5659..6462
DNA (804bp) protein (268aa)
Putative uncharacterized protein bin=GWF2_Bacteroidetes_38_335 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
anamox3_curated_scaffold_12_6
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6469..9261)
DNA (2793bp) protein (931aa)
Peptidase S8/S53 subtilisin kexin sedolisin Tax=Saprospira grandis (strain Lewin) RepID=H6L4M3_SAPGL
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8/S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AFC23947.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (strain Lewin).;"
anamox3_curated_scaffold_12_trna_1
unknown

Not on your lists

9327..9397
DNA (71bp)
transferRNA Cys
anamox3_curated_scaffold_12_7
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9460..10734)
DNA (1275bp) protein (425aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KXX4_HALH1
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase
anamox3_curated_scaffold_12_8
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10799..11980
DNA (1182bp) protein (394aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G548_ECHVK
S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)
anamox3_curated_scaffold_12_9
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11996..13264
DNA (1269bp) protein (423aa)
Uncharacterized protein Tax=Saprospira grandis DSM 2844 RepID=J1I5C4_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EJF53583.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis DSM 2844.;"
hypothetical protein
anamox3_curated_scaffold_12_10
R_OD1_Falkowbacteria_39_33, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(13271..14101)
DNA (831bp) protein (277aa)
high-affinity iron transporter; K07243 high-affinity iron transporter bin=GWC1_Spirochaetes_27_15 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
iron permease FTR1
Tax=RIFCSPLOWO2_01_FULL_OD1_Falkowbacteria_39_33_curated
anamox3_curated_scaffold_12_11
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14107..14634)
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4ANQ8_FLELS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM05593.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 /; NCIMB 1366 / Sio-4).;"
anamox3_curated_scaffold_12_12
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14797..15504
DNA (708bp) protein (236aa)
transcriptional regulator Tax=Echinicola pacifica RepID=UPI0003660588
hypothetical protein
Probable transcriptional regulatory protein Cycma_1708 {ECO:0000256|HAMAP-Rule:MF_00693}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
anamox3_curated_scaffold_12_13
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15516..16403)
DNA (888bp) protein (296aa)
Putative uncharacterized protein bin=GWF2_Bacteroidetes_38_335 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9_curated
anamox3_curated_scaffold_12_14
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16407..18800)
DNA (2394bp) protein (798aa)
TonB-dependent receptor plug bin=GWF2_Bacteroidetes_33_38 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
TonB-dependent receptor plug
Tax=GWF2_Bacteroidetes_35_48_curated
anamox3_curated_scaffold_12_15
unknown

Not on your lists

18918..19061
DNA (144bp) protein (48aa)

This feature has no annotations

anamox3_curated_scaffold_12_trna_2
unknown

Not on your lists

18928..19002
DNA (75bp)
transferRNA Pro
anamox3_curated_scaffold_12_16
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19682..21748
DNA (2067bp) protein (689aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase Tax=Parabacteroides sp. D25 RepID=K5ZV53_9PORP
anamox3_curated_scaffold_12_17
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

comp(21755..24055)
DNA (2301bp) protein (767aa)
Cell wall surface anchor family protein bin=GWE2_Bacteroidetes_42_42 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
PKD domain-containing protein
Tax=GWF2_Bacteroidetes_43_63_curated
anamox3_curated_scaffold_12_18
unknown

Not on your lists

comp(24071..24481)
DNA (411bp) protein (137aa)

This feature has no annotations

anamox3_curated_scaffold_12_19
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24677..25759)
DNA (1083bp) protein (361aa)
Endonuclease/exonuclease/phosphatase Tax=Saprospira grandis (strain Lewin) RepID=H6L7S8_SAPGL
endonuclease/exonuclease/phosphatase
Tax=GWA2_Bacteroidetes_31_9b_curated
anamox3_curated_scaffold_12_20
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25809..27269)
DNA (1461bp) protein (487aa)
Membrane protein involved in the export of O-antigen and teichoic acid bin=GWC2_Bacteroidetes_33_15 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_33_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=GWA2_Bacteroidetes_30_7_curated
anamox3_curated_scaffold_12_21
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27259..28863)
DNA (1605bp) protein (535aa)
Putative uncharacterized protein bin=GWF2_Bacteroidetes_33_38 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein
Tax=GWF2_Bacteroidetes_33_38_curated
anamox3_curated_scaffold_12_22
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

28888..30054
DNA (1167bp) protein (389aa)
A-glycosyltransferase, glycosyltransferase family 4 protein bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
a-glycosyltransferase
Tax=BJP_IG2103_Bacteroidetes_37_22
anamox3_curated_scaffold_12_23
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30096..30311
DNA (216bp) protein (72aa)
hypothetical protein Tax=Anaerophaga thermohalophila RepID=UPI000237D1FA
Heavy metal-associated protein {ECO:0000313|EMBL:KIO45668.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
protein containing heavy-metal-associated domain-containing protein
anamox3_curated_scaffold_12_24
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30308..31204
DNA (897bp) protein (299aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KHJ37859.1}; EC=1.1.1.133 {ECO:0000313|EMBL:KHJ37859.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
dTDP-4-dehydrorhamnose reductase Tax=Mariniradius saccharolyticus AK6 RepID=M7X8J8_9BACT
dTDP-4-dehydrorhamnose reductase
anamox3_curated_scaffold_12_25
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31495..35928
DNA (4434bp) protein (1478aa)
CRISPR-associated endonuclease Cas9 {ECO:0000256|HAMAP-Rule:MF_01480}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01480};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
CRISPR-associated protein cas9/csn1, subtype II/nmemi Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1M8Y6_9FLAO
hypothetical protein
anamox3_curated_scaffold_12_26
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35939..36574
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=Niabella soli DSM 19437 RepID=H1NJM5_9SPHI
transposase
Transposase {ECO:0000313|EMBL:AHF14195.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox3_curated_scaffold_12_27
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36588..37553
DNA (966bp) protein (322aa)
CRISPR-associated endonuclease cas1, subtype II/nmeni bin=GWC2_Bacteroidetes_40_13 species=Barnesiella intestinihominis genus=Barnesiella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
CRISPR-associated protein Cas1
Tax=GWA2_Bacteroidetes_30_7_curated
anamox3_curated_scaffold_12_28
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37528..37872
DNA (345bp) protein (115aa)
CRISPR-associated endoribonuclease cas2 bin=GWD2_Bacteroidetes_40_43 species=Barnesiella intestinihominis genus=Barnesiella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
CRISPR-associated protein Cas2
Tax=GWA2_Bacteroidetes_31_9_curated
Displaying items 1-30 of 253 in total

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