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anamox3_curated_scaffold_2561

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_2561_1
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(2..2800)
DNA (2799bp) protein (933aa)
DNA-directed RNA polymerase subunit beta bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
rpoB; DNA-directed RNA polymerase subunit beta
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_2561_2
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


comp(3029..3415)
DNA (387bp) protein (129aa)
50S ribosomal protein L7/L12 bin=GWF2_Ignavibacteria_33_9 species=Ethanoligenens harbinense genus=Ethanoligenens taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
rplL; 50S ribosomal protein L7/L12
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_2561_3
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


comp(3454..3981)
DNA (528bp) protein (176aa)
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 bin=BACIGN_2 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
rplJ; 50S ribosomal protein L10
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_2561_4
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


comp(4077..4775)
DNA (699bp) protein (233aa)
50S ribosomal protein L1 bin=GWB2_Ignavibacteria_35_12 species=Bacillus azotoformans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
50S ribosomal protein L1
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_2561_5
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


comp(4802..5227)
DNA (426bp) protein (142aa)
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 bin=BACIGN_2 species=[Eubacterium] infirmum genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP
rplK; 50S ribosomal protein L11
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_2561_6
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(5253..5822)
DNA (570bp) protein (190aa)
Transcription antitermination protein nusG bin=GWF2_Ignavibacteria_33_9 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Transcriptional antiterminator NusG
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_2561_7
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(5829..6011)
DNA (183bp) protein (61aa)
Preprotein translocase subunit SecE bin=GWA2_Ignavibacteria-rel_35_8 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
preprotein translocase subunit SecE
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_2561_trna_4
unknown

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comp(6072..6144)
DNA (73bp)
transferRNA Trp
anamox3_curated_scaffold_2561_trna_3
unknown

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comp(6152..6224)
DNA (73bp)
transferRNA Thr
anamox3_curated_scaffold_2561_trna_2
unknown

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comp(6270..6342)
DNA (73bp)
transferRNA Gly
anamox3_curated_scaffold_2561_trna_1
unknown

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comp(6357..6440)
DNA (84bp)
transferRNA Tyr
anamox3_curated_scaffold_2561_8
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(6524..7090)
DNA (567bp) protein (189aa)
recQ1; ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L5D5_ZOBGA
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_2561_9
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(7110..9095)
DNA (1986bp) protein (662aa)
RecQ familyATP-dependent DNA helicase; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] bin=BACIGN_2 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=BACIGN_2 organism_group=Unknown_CP
ATP-dependent DNA helicase, RecQ family
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_2561_10
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

9239..9544
DNA (306bp) protein (102aa)
Chemotaxis protein MotB bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
OmpA/MotB domain-containing protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_2561_11
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

9994..10416
DNA (423bp) protein (141aa)
Flagellar assembly factor FliW bin=GWB2_Ignavibacteria_35_12 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
flagellar assembly protein FliW
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_2561_12
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

10433..10732
DNA (300bp) protein (100aa)
Carbon storage regulator homolog bin=GWA2_Ignavibacteria-rel_35_8 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
csrA; carbon storage regulator
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_2561_13
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

10747..11403
DNA (657bp) protein (219aa)
Response regulator receiver protein bin=GWA2_Ignavibacteria-rel_35_8 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
adenylate/guanylate cyclase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_2561_14
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

11405..12613
DNA (1209bp) protein (403aa)
Putative uncharacterized protein bin=GWA2_Ignavibacteria-rel_35_8 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hydrolase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_2561_15
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(12756..12971)
DNA (216bp) protein (72aa)
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_2561_16
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(12971..13486)
DNA (516bp) protein (172aa)
Carbamoyl-phosphate synthase L chain/biotin carboxylase bin=GWB2_Ignavibacteria_35_12 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
acetyl/propionyl-CoA carboxylase subunit alpha
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_2561_17
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

13620..14906
DNA (1287bp) protein (429aa)
Putative uncharacterized protein bin=GWB2_Ignavibacteria_35_12 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
membrane-bound serine protease
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_2561_18
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

14961..17774
DNA (2814bp) protein (938aa)
Peptidase S8 and S53 subtilisin kexin sedolisin bin=GWB2_Ignavibacteria_35_12 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
peptidase s8 and s53 subtilisin kexin sedolisin
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_2561_19
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(17832..18416)
DNA (585bp) protein (195aa)
hypothetical protein bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_2561_20
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18406..19203)
DNA (798bp) protein (266aa)
Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) Tax=Butyrivibrio sp. CAG:318 RepID=R6QIV8_9FIRM
Pantothenate kinase
Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) {ECO:0000313|EMBL:CDC35715.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
anamox3_curated_scaffold_2561_21
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(19703..20905)
DNA (1203bp) protein (401aa)
cystathionine gamma-synthase (EC:2.5.1.48)
Cys/Met metabolism PLP-dependent enzyme bin=GWA2_Ignavibacteria-rel_35_8 species=Polaribacter sp. MED152 genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
Tax=BJP_IG2069_Ignavibacteriae_38_11
Displaying 25 items

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