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anamox1_curated_scaffold_1349

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1349_1
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1..882
DNA (882bp) protein (294aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037E9C41
Contig8, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78603.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
dinucleotide-utilizing protein
anamox1_curated_scaffold_1349_2
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

895..1332
DNA (438bp) protein (146aa)
hypothetical protein Tax=Nafulsella turpanensis RepID=UPI000348AD1A
molybdopterin biosynthesis MoaE protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
anamox1_curated_scaffold_1349_3
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

1304..2260
DNA (957bp) protein (319aa)
cyclic pyranopterin monophosphate synthase subunit MoaC (EC:4.1.99.18)
hypothetical protein Tax=Nafulsella turpanensis RepID=UPI000349AF76
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
anamox1_curated_scaffold_1349_4
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(2361..5564)
DNA (3204bp) protein (1068aa)
Peptidase S41 Tax=uncultured candidate division OP1 bacterium RepID=H5SS53_9BACT
Peptidase S41 {ECO:0000313|EMBL:KIE09423.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
peptidase S41
anamox1_curated_scaffold_1349_5
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(5589..5888)
DNA (300bp) protein (100aa)
id=7718818 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1349_6
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(5988..6698)
DNA (711bp) protein (237aa)
OmpR family response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
OmpR family response regulator
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_1349_7
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(6722..8164)
DNA (1443bp) protein (481aa)
tetratricopeptide domain-containing protein bin=BACIGN_2 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
anamox1_curated_scaffold_1349_8
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8625..9050
DNA (426bp) protein (142aa)
major anaerobically induced transmembrane protein (EC:1.7.2.1); K00368 nitrite reductase (NO-forming) [EC:1.7.2.1] bin=BACIGN_2 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
membrane protein
Membrane protein {ECO:0000313|EMBL:AIF49416.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
anamox1_curated_scaffold_1349_trna_1
unknown

Not on your lists

comp(9243..9316)
DNA (74bp)
transferRNA Arg
anamox1_curated_scaffold_1349_9
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists


comp(9339..9593)
DNA (255bp) protein (85aa)
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
rpsT; 30S ribosomal protein S20
Tax=GWF2_RIF_IGX_33_9_curated
anamox1_curated_scaffold_1349_10
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(9754..10656)
DNA (903bp) protein (301aa)
crtB; phytoene synthase; K02291 phytoene synthase [EC:2.5.1.32] bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
crtB; phytoene synthase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1349_11
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(10628..11569)
DNA (942bp) protein (314aa)
squalene synthase (EC:2.5.1.32)
Squalene/phytoene synthase bin=GWA2_Ignavibacteria-rel_35_8 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1349_12
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

11710..12309
DNA (600bp) protein (200aa)
Membrane-associated phospholipid phosphatase bin=GWB2_Ignavibacteria_35_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Membrane-associated phospholipid phosphatase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1349_13
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

12306..13940
DNA (1635bp) protein (545aa)
gntK; APH family phosphotransferase fused to gluconate kinase family enzyme; K07028 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
gntK; APH family phosphotransferase fused to gluconate kinase family enzyme
Tax=CSP1_2_Dadabacteria
anamox1_curated_scaffold_1349_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13980..15158
DNA (1179bp) protein (393aa)
hypothetical protein Tax=Methylosarcina fibrata RepID=UPI000363E8AC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96654.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_1349_15
BJP_IG2102_Cloacimonetes_48_20, Cloacimonetes, Bacteria

Not on your lists

15109..16287
DNA (1179bp) protein (393aa)
hypothetical protein Tax=candidate division KSB1 RepID=UPI00037A3095
hypothetical protein
Tax=BJP_IG2102_Cloacimonetes_48_20
anamox1_curated_scaffold_1349_16
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

16232..17626
DNA (1395bp) protein (465aa)
hypothetical protein bin=bin1_lowGC species=Methanococcoides burtonii genus=Methanococcoides taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
anamox1_curated_scaffold_1349_17
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17674..18090)
DNA (417bp) protein (139aa)
Putative membrane protein Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YXU1_AEQSU
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFL81809.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
anamox1_curated_scaffold_1349_18
unknown

Not on your lists

18125..18361
DNA (237bp) protein (79aa)

This feature has no annotations

anamox1_curated_scaffold_1349_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18365..19864
DNA (1500bp) protein (500aa)
carboxypeptidase; K01299 carboxypeptidase Taq [EC:3.4.17.19] bin=BACIGN_2 species=Salinibacter ruber genus=Salinibacter taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Thermostable carboxypeptidase 1 {ECO:0000313|EMBL:CBH25623.1}; EC=3.4.17.19 {ECO:0000313|EMBL:CBH25623.1};; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8).;"
carboxypeptidase
anamox1_curated_scaffold_1349_20
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

19918..20673
DNA (756bp) protein (252aa)
Putative uncharacterized protein Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QT41_CHLT3
Uncharacterized protein {ECO:0000313|EMBL:KER10671.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
hypothetical protein
anamox1_curated_scaffold_1349_21
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20688..20909)
DNA (222bp) protein (74aa)
transposase, IS204/IS1001/IS1096/IS1165 Tax=Verrucomicrobium spinosum RepID=UPI0001746896
Uncharacterized protein {ECO:0000313|EMBL:CEN52126.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
Displaying 22 items

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