ggKbase home page

anamox1_curated_scaffold_277

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_277_1
unknown

Not on your lists

comp(1..321)
DNA (321bp) protein (107aa)

This feature has no annotations

anamox1_curated_scaffold_277_2

Not on your lists

622..975
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2A6N2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD51898.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
anamox1_curated_scaffold_277_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(1037..2173)
DNA (1137bp) protein (379aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PDY3_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41442.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox1_curated_scaffold_277_4
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2189..2620)
DNA (432bp) protein (144aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
Putative Holliday junction resolvase Tax=Oribacterium RepID=G9WJW6_9FIRM
Holliday junction resolvase YqgF
anamox1_curated_scaffold_277_5
R_OP11_Curtissbacteria_41_11, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

2725..3000
DNA (276bp) protein (92aa)
acylphosphatase (EC:3.6.1.7)
Acylphosphatase Tax=Plesiocystis pacifica SIR-1 RepID=A6GER2_9DELT
Tax=RIFCSPHIGHO2_01_FULL_OP11_Curtissbacteria_41_11_curated
anamox1_curated_scaffold_277_6
unknown

Not on your lists

3016..3774
DNA (759bp) protein (253aa)

This feature has no annotations

anamox1_curated_scaffold_277_7
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3797..4276)
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2A1U9_9BACT
Tax=GWA2_Deltaproteobacteria_45_12_curated
anamox1_curated_scaffold_277_8
R_Deltaproteobacteria_50_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4404..6839)
DNA (2436bp) protein (812aa)
DNA gyrase subunit B bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
gyrB; DNA gyrase subunit B
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_50_16_curated
anamox1_curated_scaffold_277_9
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7006..8085)
DNA (1080bp) protein (360aa)
DNA replication and repair protein RecF bin=GWB2_Geobacter-like_52_12 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
recF; recombination protein F
Tax=GWC2_Geobacteraceae_53_11_curated
anamox1_curated_scaffold_277_10
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8089..9192)
DNA (1104bp) protein (368aa)
DNA polymerase III subunit beta bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
dnaN; DNA polymerase III subunit beta
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
anamox1_curated_scaffold_277_11
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9542..10906)
DNA (1365bp) protein (455aa)
Chromosomal replication initiator protein DnaA Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=DNAA_GEODF
chromosomal replication initiation protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_40_28_curated
anamox1_curated_scaffold_277_12
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11542..11691
DNA (150bp) protein (50aa)
Ribosomal protein L34 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FZG0_STIAD
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
anamox1_curated_scaffold_277_13
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12161..12382
DNA (222bp) protein (74aa)
hypothetical protein Tax=Actinokineospora enzanensis RepID=UPI000362570C
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000255|HAMAP-Rule:MF_00386}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
anamox1_curated_scaffold_277_14
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12399..14027
DNA (1629bp) protein (543aa)
Membrane protein oxaA Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZF7_DESAC bin=ACD73 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
membrane protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_40_28_curated
anamox1_curated_scaffold_277_15
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

14070..15452
DNA (1383bp) protein (461aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 /; YP87).;"
tRNA modification GTPase MnmE Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YLC5_THEYD
trmE; tRNA modification GTPase TrmE
anamox1_curated_scaffold_277_16

Not on your lists

15515..16426
DNA (912bp) protein (304aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YYH4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD42177.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ErfK/YbiS/YcfS/YnhG family protein
anamox1_curated_scaffold_277_17
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16652..18556
DNA (1905bp) protein (635aa)
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme bin=bin1_lowGC species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
anamox1_curated_scaffold_277_18
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18553..19221
DNA (669bp) protein (223aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000255|HAMAP-Rule:MF_00074}; EC=2.1.1.170 {ECO:0000255|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000255|HAMAP-Rule:MF_00074}; Short=16S rRNA m7G methyltransferase {ECO:0000255|HAMAP-Rule:MF_00074};; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
Ribosomal RNA small subunit methyltransferase G Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=RSMG_METFK
methyltransferase GidB
anamox1_curated_scaffold_277_19
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

19368..20183
DNA (816bp) protein (272aa)
Chromosome partitioning ATPase Soj Tax=Geobacter sulfurreducens RepID=D7AM16_GEOSK
chromosome partitioning ATPase Soj
Tax=RBG_13_Caldithrix_44_9_curated
anamox1_curated_scaffold_277_20
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20193..21086
DNA (894bp) protein (298aa)
ParB-like partition protein; K03497 chromosome partitioning protein, ParB family bin=ACD73 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
ParB-like partition protein
Tax=GWA2_Deltaproteobacteria_45_12_curated
anamox1_curated_scaffold_277_21
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21171..21572
DNA (402bp) protein (134aa)
Uncharacterized protein (Fragment) Tax=uncultured bacterium RepID=K1YX42_9BACT
hypothetical protein
Tax=GWA2_Deltaproteobacteria_45_12_curated
anamox1_curated_scaffold_277_22
R_Deltaproteobacteria_46_8, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21750..22190
DNA (441bp) protein (147aa)
H+transporting two-sector ATPase subunit B/B'; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] bin=bin1_lowGC species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_46_8_curated
anamox1_curated_scaffold_277_23
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22187..22756
DNA (570bp) protein (190aa)
ATPase
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterraneus.;"
ATP synthase subunit b 1 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
anamox1_curated_scaffold_277_24
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22753..23301
DNA (549bp) protein (183aa)
F0F1 ATP synthase subunit delta (EC:3.6.3.14)
ATP synthase subunit delta bin=GWF2_Geobacter_54_21 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWC2_Geobacteraceae_55_20_curated
anamox1_curated_scaffold_277_25
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23323..24831
DNA (1509bp) protein (503aa)
F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha bin=GWB2_Proteobacteria_55_19 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
anamox1_curated_scaffold_277_26
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24845..25711
DNA (867bp) protein (289aa)
ATP synthase gamma chain Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=ATPG_ANADF
F0F1 ATP synthase subunit gamma
Tax=GWA2_Deltaproteobacteria_45_12_curated
anamox1_curated_scaffold_277_27
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25766..27184
DNA (1419bp) protein (473aa)
F0F1 ATP synthase subunit beta (EC:3.6.3.14)
ATP synthase subunit beta bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=GWA2_Deltaproteobacteria_45_12_curated
anamox1_curated_scaffold_277_28
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27222..27617
DNA (396bp) protein (132aa)
atpC; ATP synthase F0F1 subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=ATPE_GEOBB
Tax=GWC2_Geobacteraceae_58_44_curated
anamox1_curated_scaffold_277_29
unknown

Not on your lists

27695..30361
DNA (2667bp) protein (889aa)

This feature has no annotations

anamox1_curated_scaffold_277_30
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30358..31020)
DNA (663bp) protein (221aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MEG8_9FIRM
Displaying items 1-30 of 50 in total

View Taxonomy