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anamox1_curated_scaffold_1151

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1151_1
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1767)
DNA (1767bp) protein (589aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00037077C3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS41300.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
anamox1_curated_scaffold_1151_2

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comp(1843..3144)
DNA (1302bp) protein (434aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI0003600485
Oxidoreductase {ECO:0000313|EMBL:BAL56459.1}; species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
dehydrogenase
anamox1_curated_scaffold_1151_3
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3496..5790)
DNA (2295bp) protein (765aa)
Nitric oxide reductase large subunit bin=GWB2_Desulfobacterales_56_26 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
nitric oxide reductase large subunit
Tax=GWB2_Desulfobacterales_56_26_curated
anamox1_curated_scaffold_1151_4
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

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comp(6226..8007)
DNA (1782bp) protein (594aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] bin=GWC2_OP3_44_8 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
anamox1_curated_scaffold_1151_5
unknown

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comp(8244..9410)
DNA (1167bp) protein (389aa)

This feature has no annotations

anamox1_curated_scaffold_1151_6
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9635..11449)
DNA (1815bp) protein (605aa)
Ribonucleoside-diphosphate reductase bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
nrdJ; ribonucleotide-diphosphate reductase subunit alpha
Tax=GWC2_Pelobacteraceae_58_13_curated
anamox1_curated_scaffold_1151_7
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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11606..12043
DNA (438bp) protein (146aa)
Uncharacterized protein Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SZ50_PLAL2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG69951.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
anamox1_curated_scaffold_1151_8
unknown

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12040..12486
DNA (447bp) protein (149aa)

This feature has no annotations

anamox1_curated_scaffold_1151_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(12483..13868)
DNA (1386bp) protein (462aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000361B61A
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABJ87981.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
anamox1_curated_scaffold_1151_10
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(14025..14855)
DNA (831bp) protein (277aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A167_MAHA5
CUT1 family carbohydrate ABC transporter membrane protein 2
Carbohydrate ABC transporter membrane protein 2, CUT1 family {ECO:0000313|EMBL:AEE95970.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
anamox1_curated_scaffold_1151_11
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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comp(14857..17124)
DNA (2268bp) protein (756aa)
ABC-type sugar transport systems, permease components Tax=Chthonomonas calidirosea T49 RepID=S0ET57_9BACT
ABC-type sugar transport systems, permease components
ABC-type sugar transport systems, permease components {ECO:0000313|EMBL:CCW34240.1}; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
anamox1_curated_scaffold_1151_12
Cyanobacterium stanieri, Cyanobacterium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

17337..18203
DNA (867bp) protein (289aa)
formyltetrahydrofolate deformylase (EC:3.5.1.10)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobacterium.;" source="Cyanobacterium stanieri (strain ATCC 29140 / PCC 7202).;"
formyltetrahydrofolate deformylase Tax=Geitlerinema sp. PCC 7105 RepID=UPI00034792B4
anamox1_curated_scaffold_1151_13
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18247..19110
DNA (864bp) protein (288aa)
sugar phosphate isomerase Tax=Paenibacillus sp. JC66 RepID=UPI0002890064
Sugar phosphate isomerase {ECO:0000313|EMBL:KEQ24505.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
sugar phosphate isomerase/epimerase
anamox1_curated_scaffold_1151_14
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

19117..20508
DNA (1392bp) protein (464aa)
hypothetical protein Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI00037A40B8
sigma-54-dependent transcriptional response regulator
Tax=BJP_IG2102_BRC1_58_13
anamox1_curated_scaffold_1151_15
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20592..20945
DNA (354bp) protein (118aa)
Putative transcriptional regulator, ArsR family protein Tax=Planctomyces maris DSM 8797 RepID=A6C064_9PLAN
Putative transcriptional regulator, ArsR family protein {ECO:0000313|EMBL:EDL62087.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
ArsR family transcriptional regulator
anamox1_curated_scaffold_1151_16
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

21008..22312
DNA (1305bp) protein (435aa)
Permease Tax=Rhodopirellula sp. SWK7 RepID=M5TFM6_9PLAN
permease
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
anamox1_curated_scaffold_1151_17
RLO_PLX_64_10, Bacteria

Not on your lists

22333..22602
DNA (270bp) protein (90aa)
Redox-active disulfide protein 2 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W751_DESIS
redox-active disulfide protein 2
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
anamox1_curated_scaffold_1151_18
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

22562..23041
DNA (480bp) protein (160aa)
Thioredoxin bin=GWF2_Lentisphaerae_57_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
thioredoxin domain-containing protein
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_1151_19
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23044..23721
DNA (678bp) protein (226aa)
dsbD; thiol:disulfide interchange protein bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
thiol:disulfide interchange protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
anamox1_curated_scaffold_1151_20
unknown

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comp(23660..23947)
DNA (288bp) protein (96aa)

This feature has no annotations

anamox1_curated_scaffold_1151_21
unknown

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comp(24645..25028)
DNA (384bp) protein (128aa)

This feature has no annotations

anamox1_curated_scaffold_1151_22
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25071..26225)
DNA (1155bp) protein (385aa)
YD repeat protein Tax=Clostridium thermocellum JW20 RepID=D1NKM1_CLOTM
YD repeat-containing protein
YD repeat-containing protein {ECO:0000313|EMBL:ABN51251.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
anamox1_curated_scaffold_1151_23
unknown

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26488..26712
DNA (225bp) protein (75aa)

This feature has no annotations

anamox1_curated_scaffold_1151_24
unknown

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comp(26769..27002)
DNA (234bp) protein (78aa)

This feature has no annotations

anamox1_curated_scaffold_1151_25
unknown

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27322..27513
DNA (192bp) protein (64aa)

This feature has no annotations

anamox1_curated_scaffold_1151_26
unknown

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comp(27510..27767)
DNA (258bp) protein (86aa)

This feature has no annotations

Displaying 26 items

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