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anamox1_curated_scaffold_1255

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1255_1
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..417
DNA (417bp) protein (139aa)
transposase Tax=Methylobacterium sp. 77 RepID=UPI00036EEB1F
Transposase {ECO:0000313|EMBL:EPX87689.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium thermophilum DSM 16684.;"
transposase and inactivated derivatives-like protein
anamox1_curated_scaffold_1255_2
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(670..1527)
DNA (858bp) protein (286aa)
Putative dehydrogenase Tax=Opitutaceae bacterium TAV1 RepID=I6AR13_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF91694.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
anamox1_curated_scaffold_1255_3
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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1659..2489
DNA (831bp) protein (277aa)
Sugar phosphate isomerases/epimerases Tax=Chthonomonas calidirosea T49 RepID=S0ESF4_9BACT
Sugar phosphate isomerases/epimerases
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
anamox1_curated_scaffold_1255_4
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

2535..3821
DNA (1287bp) protein (429aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
Serine hydroxymethyltransferase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IBB4_PHYMF
anamox1_curated_scaffold_1255_5
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(4012..5586)
DNA (1575bp) protein (525aa)
RNA polymerase sigma-54 factor Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0ID50_PHYMF
rpoN; RNA polymerase sigma-54 factor
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:BAM03188.1}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
anamox1_curated_scaffold_1255_6

Not on your lists

comp(5702..6328)
DNA (627bp) protein (209aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN55570.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Recombination protein RecR bin=GWF2_Planctomycetes_50_10 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
recombination protein RecR
anamox1_curated_scaffold_1255_7
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6489..6758
DNA (270bp) protein (90aa)
Uncharacterized protein Tax=Blastopirellula marina DSM 3645 RepID=A4A294_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EAQ77126.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
BFD (2Fe-2S)-binding domain-containing protein
anamox1_curated_scaffold_1255_8
RLO_PLX_64_10, Bacteria

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comp(6775..7665)
DNA (891bp) protein (297aa)
Uncharacterized protein Tax=Halosimplex carlsbadense 2-9-1 RepID=M0C9I3_9EURY
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
anamox1_curated_scaffold_1255_9
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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8088..9425
DNA (1338bp) protein (446aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000375A54D
Neutral/alkaline non-lysosomal ceramidase
Tax=GWF2_Verrucomicrobia_62_7_curated
anamox1_curated_scaffold_1255_trna_1
unknown

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9605..9691
DNA (87bp)
transferRNA Leu
anamox1_curated_scaffold_1255_10
unknown

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9863..10123
DNA (261bp) protein (87aa)

This feature has no annotations

anamox1_curated_scaffold_1255_11
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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10191..11702
DNA (1512bp) protein (504aa)
Putative uncharacterized protein bin=GWF2_Ignavibacteria_33_9 species=Methanosaeta concilii genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
anamox1_curated_scaffold_1255_12
unknown

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comp(12050..12334)
DNA (285bp) protein (95aa)

This feature has no annotations

anamox1_curated_scaffold_1255_13

Not on your lists

12516..14030
DNA (1515bp) protein (505aa)
Uncharacterized protein {ECO:0000313|EMBL:KKO11124.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Glycoside hydrolase family 4 bin=GWF2_Lentisphaerae_50_93 species=Clostridium cellulovorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
glycoside hydrolase family protein
anamox1_curated_scaffold_1255_14
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

14595..16508
DNA (1914bp) protein (638aa)
PAS/PAC sensor hybrid histidine kinase Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IEP0_METNO
PAS/PAC sensor hybrid histidine kinase
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
anamox1_curated_scaffold_1255_15
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16505..17158
DNA (654bp) protein (218aa)
Two component transcriptional regulator, LuxR family protein Tax=Planctomyces maris DSM 8797 RepID=A6C9W9_9PLAN
Two component transcriptional regulator, LuxR family protein {ECO:0000313|EMBL:EDL58607.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
LuxR family transcriptional regulator
anamox1_curated_scaffold_1255_16
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(17194..17583)
DNA (390bp) protein (130aa)
PAS/PAC Sensor Hybrid Histidine Kinase Tax=Verrucomicrobium spinosum RepID=UPI000174467C
PAS domain-containing protein
PAS domain S-box {ECO:0000313|EMBL:AGA25318.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
anamox1_curated_scaffold_1255_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17908..18372
DNA (465bp) protein (155aa)
Alkylhydroperoxidase like protein, AhpD family Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TS15_ALIDB
alkylhydroperoxidase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
anamox1_curated_scaffold_1255_18
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

18475..20976
DNA (2502bp) protein (834aa)
Helicase ATP-dependent domain protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZU70_OPITP
helicase
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
anamox1_curated_scaffold_1255_19
unknown

Not on your lists

comp(21066..21314)
DNA (249bp) protein (83aa)
hypothetical protein
anamox1_curated_scaffold_1255_20
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(21669..22592)
DNA (924bp) protein (308aa)
Uncharacterized protein Tax=Planctomyces maris DSM 8797 RepID=A6C5X1_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL59917.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
multidrug ABC transporter ATPase/permease
anamox1_curated_scaffold_1255_21
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(22610..23662)
DNA (1053bp) protein (351aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:ADY60902.1}; EC=3.6.3.44 {ECO:0000313|EMBL:ADY60902.1};; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
Xenobiotic-transporting ATPase Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SKE5_PLABD
anamox1_curated_scaffold_1255_22
unknown

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comp(23721..25223)
DNA (1503bp) protein (501aa)

This feature has no annotations

anamox1_curated_scaffold_1255_trna_2
unknown

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25411..25481
DNA (71bp)
transferRNA Gln
anamox1_curated_scaffold_1255_23
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(25976..26170)
DNA (195bp) protein (65aa)
hypothetical protein Tax=Rhizobium sp. (strain BR816) RepID=UPI0003807E11
transposase
Transposase {ECO:0000313|EMBL:EHK75341.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
anamox1_curated_scaffold_1255_24
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(26355..27482)
DNA (1128bp) protein (376aa)
putative lipoprotein bin=GWF2_Planctomycetes_42_9 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
anamox1_curated_scaffold_1255_25
unknown

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comp(27751..28068)
DNA (318bp) protein (106aa)

This feature has no annotations

anamox1_curated_scaffold_1255_26
unknown

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comp(28136..29050)
DNA (915bp) protein (305aa)

This feature has no annotations

anamox1_curated_scaffold_1255_27
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29220..30746)
DNA (1527bp) protein (509aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine decarboxylase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine dehydrogenase (aminomethyl-transferring) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus K02.;"
Probable glycine dehydrogenase (decarboxylating) subunit 2 Tax=Paenibacillus mucilaginosus RepID=F8FPU0_PAEMK
anamox1_curated_scaffold_1255_28
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30743..32128)
DNA (1386bp) protein (462aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
glycine dehydrogenase subunit alpha (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMF2_9FIRM
Displaying items 1-30 of 35 in total

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