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anamox1_curated_scaffold_1162

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1162_1
unknown

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comp(3..1040)
DNA (1038bp) protein (346aa)

This feature has no annotations

anamox1_curated_scaffold_1162_2
RBG_13_Planctomycetes_44_8b_curated, Physcisphaerae, Planctomycetes, Bacteria

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comp(1374..2834)
DNA (1461bp) protein (487aa)
sigma-54 factor interaction domain-containing protein bin=GWF2_Planctomycetes_50_10 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Fis family transcriptionel regulator
Tax=RBG_13_Planctomycetes_44_8b_curated
anamox1_curated_scaffold_1162_3
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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comp(3012..5891)
DNA (2880bp) protein (960aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
Isoleucine--tRNA ligase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IDB3_PHYMF
anamox1_curated_scaffold_1162_4
Pantoea anthophila, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6150..6503)
DNA (354bp) protein (118aa)
Membrane protein Tax=Ralstonia pickettii DTP0602 RepID=U3QGF5_RALPI
Uncharacterized protein {ECO:0000313|EMBL:KKB04155.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea anthophila.;"
membrane protein
anamox1_curated_scaffold_1162_5

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comp(6609..7118)
DNA (510bp) protein (170aa)
Uncharacterized protein Tax=Planctomyces maris DSM 8797 RepID=A6CC86_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KKO03653.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
anamox1_curated_scaffold_1162_6
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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comp(7202..8497)
DNA (1296bp) protein (432aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|SAAS:SAAS00043629};; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
Histidyl-tRNA synthetase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IC74_PHYMF
anamox1_curated_scaffold_1162_7
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(8568..9416)
DNA (849bp) protein (283aa)
Uncharacterized protein Tax=Rhodopirellula maiorica SM1 RepID=M5RYY0_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EMI20607.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
hypothetical protein
anamox1_curated_scaffold_1162_8
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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9458..10024
DNA (567bp) protein (189aa)
putative RNA methyltransferase (EC:2.1.1.-)
Putative RNA methyltransferase {ECO:0000313|EMBL:BAM02888.1}; EC=2.1.1.- {ECO:0000313|EMBL:BAM02888.1};; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
Putative RNA methyltransferase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0ICA0_PHYMF
anamox1_curated_scaffold_1162_9
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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10101..11624
DNA (1524bp) protein (508aa)
Signal recognition particle protein Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IIZ7_PHYMF
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
anamox1_curated_scaffold_1162_10
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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11821..14187
DNA (2367bp) protein (789aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
Valine--tRNA ligase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0ICH5_PHYMF
anamox1_curated_scaffold_1162_11
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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14431..15036
DNA (606bp) protein (202aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
Valine--tRNA ligase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0ICH5_PHYMF
Suspect SCG annotation. See neighboring gene [anamox1_curated_scaffold_1162_10].
anamox1_curated_scaffold_1162_12
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

15053..15823
DNA (771bp) protein (257aa)
DNA repair protein RecO Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IAJ7_PHYMF
recO; DNA repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
anamox1_curated_scaffold_1162_13
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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15892..16299
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IID5_PHYMF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM05023.1}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
anamox1_curated_scaffold_1162_14
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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16382..17389
DNA (1008bp) protein (336aa)
UDP-glucuronate decarboxylase (EC:4.1.1.35)
UDP-glucuronate decarboxylase {ECO:0000313|EMBL:BAM05024.1}; EC=4.1.1.35 {ECO:0000313|EMBL:BAM05024.1};; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
UDP-glucuronate decarboxylase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IID6_PHYMF
anamox1_curated_scaffold_1162_15
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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17538..18365
DNA (828bp) protein (276aa)
Putative oxidoreductase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IBU4_PHYMF
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAM02732.1}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
anamox1_curated_scaffold_1162_16
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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18374..19300
DNA (927bp) protein (309aa)
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine 6-phosphate deacetylase {ECO:0000313|EMBL:ADY60964.1}; EC=3.5.1.25 {ECO:0000313|EMBL:ADY60964.1};; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
N-acetylglucosamine-6-phosphate deacetylase NAGA Tax=Verrucomicrobium spinosum RepID=UPI00017452AA
anamox1_curated_scaffold_1162_17
Synechococcus sp. PCC 7335, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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19431..20078
DNA (648bp) protein (216aa)
Putative uncharacterized protein Tax=Synechococcus sp. PCC 7335 RepID=B4WGT3_9SYNE
Putative uncharacterized protein {ECO:0000313|EMBL:EDX86445.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. PCC 7335.;"
hypothetical protein
anamox1_curated_scaffold_1162_18
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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20138..23011
DNA (2874bp) protein (958aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
Leucine--tRNA ligase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IDC7_PHYMF
anamox1_curated_scaffold_1162_19
Oxalobacter formigenes, Oxalobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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23017..23334
DNA (318bp) protein (106aa)
Transporter Tax=Rhodanobacter denitrificans RepID=I4WY19_9GAMM
cation/cationic drug transporter
Multidrug resistance protein, SMR family {ECO:0000313|EMBL:EEO29399.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Oxalobacter.;" source="Oxalobacter formigenes OXCC13.;"
Displaying 19 items

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