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anamox1_curated_scaffold_1125

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1125_1
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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comp(1..795)
DNA (795bp) protein (265aa)
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
DNA-directed RNA polymerase subunit beta' Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IH65_PHYMF
anamox1_curated_scaffold_1125_2
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(876..4667)
DNA (3792bp) protein (1264aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IH66_PHYMF
anamox1_curated_scaffold_1125_3
Rubidibacter lacunae, Rubidibacter, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

5248..8076
DNA (2829bp) protein (943aa)
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DG31_9CHRO
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family {ECO:0000313|EMBL:ERN40551.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Rubidibacter.;" source="Rubidibacter lacunae KORDI 51-2.;"
peptidyl-prolyl cis-trans isomerase cyclophilin type
anamox1_curated_scaffold_1125_4
RLO_PLX_64_10, Bacteria

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comp(8098..9228)
DNA (1131bp) protein (377aa)
hypothetical protein Tax=Desulfurispora thermophila RepID=UPI00036BEE58
mechanosensitive ion channel MscS
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
anamox1_curated_scaffold_1125_5
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(9650..10909)
DNA (1260bp) protein (420aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IBV0_PHYMF
anamox1_curated_scaffold_1125_6
unknown

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comp(11118..11897)
DNA (780bp) protein (260aa)

This feature has no annotations

anamox1_curated_scaffold_1125_7
unknown

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comp(12114..12728)
DNA (615bp) protein (205aa)

This feature has no annotations

anamox1_curated_scaffold_1125_8
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

12863..13948
DNA (1086bp) protein (362aa)
pmi; mannose-6-phosphate isomerase (EC:5.3.1.8)
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:BAM02774.1}; EC=5.3.1.8 {ECO:0000313|EMBL:BAM02774.1};; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
Mannose-6-phosphate isomerase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IBY6_PHYMF
anamox1_curated_scaffold_1125_9
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(13974..14555)
DNA (582bp) protein (194aa)
Uncharacterized protein Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IID2_PHYMF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM05020.1}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
anamox1_curated_scaffold_1125_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(14589..15302)
DNA (714bp) protein (238aa)
Methyltransferase family protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DH25_SINAD
methyltransferase family protein
Methyltransferase family protein {ECO:0000313|EMBL:AGA28118.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
anamox1_curated_scaffold_1125_11
BJP_08E140C01_Elusimicrobia_64_11, Elusimicrobia lineage IV, Elusimicrobia, Bacteria

Not on your lists

comp(15299..16267)
DNA (969bp) protein (323aa)
Glycosyl transferase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFF9_SINAD
glycosyl transferase family protein
Tax=BJP_08E140C01_Elusimicrobia_64_11
anamox1_curated_scaffold_1125_12
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(16367..17584)
DNA (1218bp) protein (406aa)
Uncharacterized protein bin=GWF2_Lentisphaerae_52_8 species=Streptomyces hygroscopicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
hypothetical protein
Tax=CG_Arma_02
anamox1_curated_scaffold_1125_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17602..19299)
DNA (1698bp) protein (566aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123, ECO:0000313|EMBL:CAN97829.1};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Arginine--tRNA ligase Tax=Sorangium cellulosum (strain So ce56) RepID=A9F5R2_SORC5
argS; arginyl-tRNA synthetase
anamox1_curated_scaffold_1125_14
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(19478..20311)
DNA (834bp) protein (278aa)
RNA polymerase sigma factor Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IGQ0_PHYMF
fliA; RNA polymerase sigma factor for flagellar operon
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
anamox1_curated_scaffold_1125_15
unknown

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comp(20452..20769)
DNA (318bp) protein (106aa)

This feature has no annotations

anamox1_curated_scaffold_1125_16
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(20937..21803)
DNA (867bp) protein (289aa)
Site-determining protein Tax=Spirochaeta thermophila RepID=E0RS92_SPITD
fleN2; flagellar synthesis regulator FleN
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203).;"
anamox1_curated_scaffold_1125_17
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(21800..23122)
DNA (1323bp) protein (441aa)
Putative flagellar biosynthesis protein FlhF Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IGQ4_PHYMF
flhF; putative flagellar biosynthesis protein FlhF
Putative flagellar biosynthesis protein FlhF {ECO:0000313|EMBL:BAM04442.1}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
anamox1_curated_scaffold_1125_18
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(23161..24078)
DNA (918bp) protein (306aa)
Flagellar biosynthesis protein FlhA Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IGQ5_PHYMF
flhA; flagellar biosynthesis protein FlhA
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:BAM04443.1}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
Displaying 18 items

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