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anamox1_curated_scaffold_1531

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1531_1

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3..245
DNA (243bp) protein (81aa)
Marine sediment metagenome DNA, contig: S03H2_S05906 {ECO:0000313|EMBL:GAH55720.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
anamox1_curated_scaffold_1531_2

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585..1673
DNA (1089bp) protein (363aa)
Uncharacterized protein {ECO:0000313|EMBL:KKO00740.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit bin=GWF2_Planctomycetes_50_10 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
oxidoreductase FAD/NAD(P)-binding domain-containing protein
anamox1_curated_scaffold_1531_3
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2153..2827)
DNA (675bp) protein (225aa)
Uncharacterized protein Tax=Thioflavicoccus mobilis 8321 RepID=L0H4A8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA92434.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
anamox1_curated_scaffold_1531_4
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2829..4808)
DNA (1980bp) protein (660aa)
DNA/RNA helicase, superfamily I Tax=Thioflavicoccus mobilis 8321 RepID=L0H434_9GAMM
DNA/RNA helicase
DNA/RNA helicase, superfamily I {ECO:0000313|EMBL:AGA92435.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
anamox1_curated_scaffold_1531_5
unknown

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comp(5264..5731)
DNA (468bp) protein (156aa)

This feature has no annotations

anamox1_curated_scaffold_1531_6
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6048..6857
DNA (810bp) protein (270aa)
HpcH/HpaI aldolase Tax=Desulfitobacterium hafniense RepID=B8FRX2_DESHD
HpcH/HpaI aldolase
HpcH/HpaI aldolase {ECO:0000313|EMBL:ACL20110.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain DCB-2 / DSM 10664).;"
anamox1_curated_scaffold_1531_7
CG_Arma_02, Armatimonadetes, Bacteria

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7196..8308
DNA (1113bp) protein (371aa)
oxidoreductase Tax=Paenibacillus ginsengihumi RepID=UPI00036BC202
Predicted dehydrogenases and related proteins
Tax=CG_Arma_02
anamox1_curated_scaffold_1531_8
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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comp(8318..9673)
DNA (1356bp) protein (452aa)
Uncharacterized protein Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IJ75_PHYMF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM05313.1}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
anamox1_curated_scaffold_1531_9
BJP_IG2158_Planctomycetes_45_10, Phycisphaerae, Planctomycetes, Bacteria

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comp(9754..10224)
DNA (471bp) protein (157aa)
Putative uncharacterized protein bin=GWC2_Planctomycetes_45_44 species=Planctomyces limnophilus genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
putative fimbrial protein
Tax=BJP_IG2158_Planctomycetes_45_10
anamox1_curated_scaffold_1531_10
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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10418..12262
DNA (1845bp) protein (615aa)
Single-stranded-DNA-specific exonuclease RecJ Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IJ72_PHYMF
recJ; single-stranded-DNA-specific exonuclease RecJ
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:BAM05310.1}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
anamox1_curated_scaffold_1531_11
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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12640..13335
DNA (696bp) protein (232aa)
PEP-CTERM motif protein {ECO:0000313|EMBL:KFB74182.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
anamox1_curated_scaffold_1531_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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13377..13985
DNA (609bp) protein (203aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KW18_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96921.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
anamox1_curated_scaffold_1531_13
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

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13982..14263
DNA (282bp) protein (94aa)
hypothetical protein Tax=Thiobacillus denitrificans RepID=UPI00035D6410
Helix-turn-helix domain protein {ECO:0000313|EMBL:KFZ91425.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
helix-turn-helix motif protein
anamox1_curated_scaffold_1531_14
unknown

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14582..15217
DNA (636bp) protein (212aa)

This feature has no annotations

anamox1_curated_scaffold_1531_15
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(15437..17173)
DNA (1737bp) protein (579aa)
arnT; undecaprenyl-diphospho-4-amino-4-deoxy-L-arabinose--lipid A 4-amino-4-deoxy-L-arabinose transferase
Dolichyl-phosphate-mannose-protein mannosyltransferase family protein bin=GWC2_Planctomycetes_45_44 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
Tax=RBG_16_Deltaproteobacteria_54_18_curated
anamox1_curated_scaffold_1531_16
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

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17468..18970
DNA (1503bp) protein (501aa)
hypothetical protein
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
Displaying 16 items

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