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anamox1_curated_scaffold_46

Search features with annotation key words

Displaying items 1-30 of 183 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_46_1
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159..362)
DNA (204bp) protein (68aa)
Cold-shock DNA-binding domain protein Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NCN0_DESAR
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:AEB09164.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
anamox1_curated_scaffold_46_2
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(551..1366)
DNA (816bp) protein (272aa)
Pseudouridine synthase, RluA family Tax=Desulfovibrio sp. FW1012B RepID=G7QE34_9DELT
RluA family pseudouridine synthase
Tax=RBG_13_Acidobacteria_68_16_curated
anamox1_curated_scaffold_46_3
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1402..1869
DNA (468bp) protein (156aa)
Uncharacterized protein Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SCT2_PHAFV
Uncharacterized protein {ECO:0000313|EMBL:EPY02534.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
hypothetical protein
anamox1_curated_scaffold_46_4
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

comp(1879..3255)
DNA (1377bp) protein (459aa)
hypothetical protein bin=CD_OP8_4m species=Zavarzinella formosa genus=Zavarzinella taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Xanthine/uracil/vitamin C permease
Tax=RBG_16_Aminicenantes_63_16_curated
anamox1_curated_scaffold_46_5
GWA2_Elusimicrobia_51_34_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3252..4667)
DNA (1416bp) protein (472aa)
hypothetical protein bin=GWA2_Elusimicrobia_51_34 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
hypothetical protein
Tax=GWA2_Elusimicrobia_51_34_curated
anamox1_curated_scaffold_46_6
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4660..5139)
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4IXU1_9DELT
hypothetical protein
Tax=CG_Ignavi_02
anamox1_curated_scaffold_46_7
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5449..6510
DNA (1062bp) protein (354aa)
Putative lipoprotein Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CC98_MYXFH
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AEI68432.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
anamox1_curated_scaffold_46_8
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

6881..7768
DNA (888bp) protein (296aa)
Agmatinase bin=GWC2_ACD39_50_8 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
agmatinase
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
anamox1_curated_scaffold_46_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7792..8976)
DNA (1185bp) protein (395aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:CDM66824.1}; EC=2.3.1.9 {ECO:0000313|EMBL:CDM66824.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase Tax=uncultured marine group II euryarchaeote EF100_57A08 RepID=A9QP30_9EURY bin=16ft_combo_ws3_JS1 species=uncultured marine group II euryarchaeote EF100_57A08 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
anamox1_curated_scaffold_46_10
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(9014..10105)
DNA (1092bp) protein (364aa)
Beta-lactamase Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4J4_THERP
Uncharacterized protein {ECO:0000313|EMBL:KDA53903.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
beta-lactamase
anamox1_curated_scaffold_46_11
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

10131..11840
DNA (1710bp) protein (570aa)
Serine/threonine protein kinase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8C5_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:KDA54285.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
protein kinase
anamox1_curated_scaffold_46_12
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11875..13605
DNA (1731bp) protein (577aa)
Tetratricopeptide repeat protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IF21_ANADE
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ABC83182.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
anamox1_curated_scaffold_46_13
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(13592..14827)
DNA (1236bp) protein (412aa)
Glycosyl transferase group 1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G5I2_CHLAD
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACL25688.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
anamox1_curated_scaffold_46_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14820..15812)
DNA (993bp) protein (331aa)
Glycosyl transferase family 2 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGM4_RHOM4
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACY49587.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
anamox1_curated_scaffold_46_15
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

15907..17919
DNA (2013bp) protein (671aa)
Tax=RBG_13_Acidobacteria_68_16_curated
anamox1_curated_scaffold_46_16
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17935..19290)
DNA (1356bp) protein (452aa)
DNA repair protein radA Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIZ7_DESAR
DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
anamox1_curated_scaffold_46_17
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(19290..20768)
DNA (1479bp) protein (493aa)
Mammalian cell entry related domain protein Tax=Holophaga foetida DSM 6591 RepID=H1P3D0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KDA53450.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
organic solvents resistance ABC transporter periplasmic protein
anamox1_curated_scaffold_46_18
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(20788..21546)
DNA (759bp) protein (253aa)
ABC transporter {ECO:0000313|EMBL:KDA53449.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ABC transporter-like protein
anamox1_curated_scaffold_46_19
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(21548..22309)
DNA (762bp) protein (254aa)
ABC-type transport system involved in resistance to organic solvents, permease component bin=GWA2_Deltaproteo_65_63 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
anamox1_curated_scaffold_46_20
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22306..23505)
DNA (1200bp) protein (400aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SM56_THEM7
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
anamox1_curated_scaffold_46_21
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(23477..24829)
DNA (1353bp) protein (451aa)
dnaC; replicative DNA helicase DnaC (EC:3.6.4.12)
Replicative DNA helicase DnaC Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LQH1_THEPS
Tax=RBG_16_Acidobacteria_70_10_curated
anamox1_curated_scaffold_46_trna_7
unknown

Not on your lists

comp(24885..24965)
DNA (81bp)
transferRNA Leu
anamox1_curated_scaffold_46_trna_6
unknown

Not on your lists

comp(25052..25129)
DNA (78bp)
transferRNA Cys
anamox1_curated_scaffold_46_trna_5
unknown

Not on your lists

comp(25223..25294)
DNA (72bp)
transferRNA Gly
anamox1_curated_scaffold_46_22
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25334..25732)
DNA (399bp) protein (133aa)
UPF0102 protein Hoch_2488 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LKH6_HALO1
hypothetical protein
UPF0102 protein Hoch_2488 {ECO:0000256|HAMAP-Rule:MF_00048}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
anamox1_curated_scaffold_46_23
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(25729..27153)
DNA (1425bp) protein (475aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
cysS; Cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase bin=GWF1_Spirochaetes_51_8 species=unknown genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
anamox1_curated_scaffold_46_24
unknown

Not on your lists

comp(27150..27710)
DNA (561bp) protein (187aa)

This feature has no annotations

anamox1_curated_scaffold_46_25
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(27728..28279)
DNA (552bp) protein (184aa)
peptide deformylase bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
peptide deformylase
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
anamox1_curated_scaffold_46_26
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28279..29166)
DNA (888bp) protein (296aa)
Uncharacterized protein Tax=Cystobacter fuscus DSM 2262 RepID=S9QUR1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KFA89458.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
putative transcriptional regulator, Crp/Fnr family
anamox1_curated_scaffold_46_27
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

29336..31702
DNA (2367bp) protein (789aa)
hypothetical protein bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
Displaying items 1-30 of 183 in total

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