ggKbase home page

anamox1_curated_scaffold_31

Search features with annotation key words

Displaying items 1-30 of 185 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_31_1
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

589..2175
DNA (1587bp) protein (529aa)
Ferredoxin-dependent glutamate synthase Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KC27_NITWC
ferredoxin-dependent glutamate synthase
Ferredoxin-dependent glutamate synthase {ECO:0000313|EMBL:ADJ29698.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
anamox1_curated_scaffold_31_2
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

2371..4173
DNA (1803bp) protein (601aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000362050F
mutL; DNA mismatch repair protein
Tax=RBG_13_Acidobacteria_68_16_curated
anamox1_curated_scaffold_31_3
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

4181..4900
DNA (720bp) protein (240aa)
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 Tax=Geobacter sp. (strain M21) RepID=C6E2H5_GEOSM
Tax=RBG_16_Nitrospirae_64_22_curated
anamox1_curated_scaffold_31_4
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

4936..6243
DNA (1308bp) protein (436aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DPR5_9FIRM
anamox1_curated_scaffold_31_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

6289..7200
DNA (912bp) protein (304aa)
DMT superfamily drug/metaboltie permease Tax=Melioribacter roseus (strain P3M) RepID=I6ZMY8_MELRP
DMT superfamily drug/metaboltie permease
Tax=RBG_16_Euryarchaeota_68_13_curated
anamox1_curated_scaffold_31_6
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7476..9254
DNA (1779bp) protein (593aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
Putative PAS/PAC sensor signal transduction histidine kinase Tax=Methylocystis sp. (strain SC2) RepID=J7Q4Y4_METSZ
PAS/PAC sensor signal transduction histidine kinase
anamox1_curated_scaffold_31_7
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9247..10596
DNA (1350bp) protein (450aa)
Sigma-54 dependent DNA-binding response regulator Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UAD3_MYXSD
Fis family transcriptional regulator {ECO:0000313|EMBL:AKF82192.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
sigma-54 dependent DNA-binding response regulator
anamox1_curated_scaffold_31_8
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10807..12546
DNA (1740bp) protein (580aa)
Uncharacterized protein Tax=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) RepID=B8J291_DESDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL49750.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949).;"
anamox1_curated_scaffold_31_9
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12590..13351
DNA (762bp) protein (254aa)
inorganic diphosphatase Tax=Desulfospira joergensenii RepID=UPI0003B78FF4
inorganic pyrophosphatase
Inorganic pyrophosphatase {ECO:0000313|EMBL:ACL49751.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949).;"
anamox1_curated_scaffold_31_10
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13383..14735
DNA (1353bp) protein (451aa)
Phosphate-selective porin Tax=Thiorhodovibrio sp. 970 RepID=H8Z4L1_9GAMM
Phosphate-selective porin {ECO:0000313|EMBL:EIC20268.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
phosphate-selective porin O and P
anamox1_curated_scaffold_31_11
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

14856..15458
DNA (603bp) protein (201aa)
Putative uncharacterized protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XTK3_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EHO41478.1}; species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
hypothetical protein
anamox1_curated_scaffold_31_12
CG_Deferri_01, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

15597..16241
DNA (645bp) protein (215aa)
Putative phosphate transport regulator Tax=Caldithrix abyssi DSM 13497 RepID=H1XTK8_9BACT
phosphate transport regulator
Tax=CG_Deferri_01
anamox1_curated_scaffold_31_13
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

16256..17365
DNA (1110bp) protein (370aa)
Putative permease Tax=Arthrospira platensis (strain NIES-39 / IAM M-135) RepID=D4ZY47_ARTPN
putative permease
Putative permease {ECO:0000313|EMBL:BAI88275.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira platensis (strain NIES-39 / IAM M-135) (Spirulina; platensis).;"
anamox1_curated_scaffold_31_14
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

17362..18408
DNA (1047bp) protein (349aa)
Phosphate transporter Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U5J5_OCEP5
phosphate transporter
Phosphate transporter {ECO:0000313|EMBL:ADR35498.1}; Flags: Precursor;; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 /; 506).;"
anamox1_curated_scaffold_31_15
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18495..20111)
DNA (1617bp) protein (539aa)
Sodium/sulphate symporter Tax=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) RepID=B8J289_DESDA
sodium/sulfate symporter
Sodium/sulphate symporter {ECO:0000313|EMBL:ACL49748.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949).;"
anamox1_curated_scaffold_31_16
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20108..20605)
DNA (498bp) protein (166aa)
Adenylate cyclase bin=GWE2_Bacteroidetes_42_24 species=unknown genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
adenylate cyclase
Tax=GWF2_Bacteroidetes_43_11_curated
anamox1_curated_scaffold_31_17
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20899..21627
DNA (729bp) protein (243aa)
hypothetical protein Tax=Desulfospira joergensenii RepID=UPI0003B74E6A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL49750.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949).;"
anamox1_curated_scaffold_31_18
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

21728..22993
DNA (1266bp) protein (422aa)
cobyrinic acid ac-diamide synthase Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625B3F
Uncharacterized protein {ECO:0000313|EMBL:KDA53255.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein
anamox1_curated_scaffold_31_19
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

23003..23962
DNA (960bp) protein (320aa)
deg:DehalGT_1086 radical SAM domain protein; K04070 putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
radical SAM protein
Tax=RBG_13_Acidobacteria_68_16_curated
anamox1_curated_scaffold_31_20
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

24009..25370
DNA (1362bp) protein (454aa)
Ribosomal protein S12 methylthiotransferase RimO Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CB97_MYXFH
putative tRNA modifying protein
Tax=RBG_13_Acidobacteria_68_16_curated
anamox1_curated_scaffold_31_21
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

25387..26370
DNA (984bp) protein (328aa)
riboflavin kinase Tax=Salinispora pacifica RepID=UPI00036481C8
riboflavin biosynthesis protein RibF
Tax=RBG_13_Acidobacteria_68_16_curated
anamox1_curated_scaffold_31_22
Haemophilus sputorum, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26425..26757
DNA (333bp) protein (111aa)
Thioredoxin Tax=Haemophilus sputorum HK 2154 RepID=J5HL50_9PAST
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sputorum HK 2154.;"
trxA; TrxA protein
anamox1_curated_scaffold_31_23
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

26754..27995
DNA (1242bp) protein (414aa)
putative M24B family peptidase (EC:3.4.-.-)
Putative M24B family peptidase {ECO:0000313|EMBL:BAJ63234.1}; EC=3.4.-.- {ECO:0000313|EMBL:BAJ63234.1};; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
Putative M24B family peptidase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N470_ANATU
anamox1_curated_scaffold_31_24
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

28088..30487
DNA (2400bp) protein (800aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PAU1_9BACT
hypothetical protein
Tax=RBG_13_Chloroflexi_68_17_curated
anamox1_curated_scaffold_31_25
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(30503..31972)
DNA (1470bp) protein (490aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.37)
Inosine-5'-monophosphate dehydrogenase Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NFV9_ROSCS
anamox1_curated_scaffold_31_26
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(32068..34770)
DNA (2703bp) protein (901aa)
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
secA; preprotein translocase subunit SecA bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
preprotein translocase subunit SecA
anamox1_curated_scaffold_31_27
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(34860..35768)
DNA (909bp) protein (303aa)
cell wall-binding protein associated metalloendopeptidase bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Peptidase, M23/M37 family
Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
anamox1_curated_scaffold_31_28
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(35863..37383)
DNA (1521bp) protein (507aa)
Putative enzyme (N-terminal) transcriptional regulator with P-loop containing NTP hydrolase domain (C-terminal)(YifB) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMN1_9BACT
transcriptional regulator
Putative enzyme (N-terminal) transcriptional regulator with P-loop containing NTP hydrolase domain (C-terminal)(YifB) {ECO:0000313|EMBL:CBE70153.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
anamox1_curated_scaffold_31_29
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(37434..39023)
DNA (1590bp) protein (530aa)
Putative alternative thymidylate synthase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHD9_CHLTF
putative alternative thymidylate synthase
Putative alternative thymidylate synthase {ECO:0000313|EMBL:AEP12202.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
anamox1_curated_scaffold_31_30
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

39158..39766
DNA (609bp) protein (203aa)
LemA family protein {ECO:0000313|EMBL:KDA53584.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
LemA family protein bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Displaying items 1-30 of 185 in total

View Taxonomy