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anamox1_curated_scaffold_1243

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1243_1
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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603..1091
DNA (489bp) protein (163aa)
Uncharacterized protein Tax=Fulvivirga imtechensis AK7 RepID=L8JRV6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR70933.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
anamox1_curated_scaffold_1243_2
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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1095..1751
DNA (657bp) protein (219aa)
NUDIX hydrolase Tax=Anaerophaga thermohalophila RepID=UPI0002D7FA40
nudix hydrolase
Tax=GWA2_Bacteroidetes_40_15_curated
anamox1_curated_scaffold_1243_3
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

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1821..2606
DNA (786bp) protein (262aa)
PKD domain containing protein bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Tax=GWA2_Bacteroidetes_32_17_curated
anamox1_curated_scaffold_1243_4
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(2968..6081)
DNA (3114bp) protein (1038aa)
serine/threonine protein kinase bin=GWD2_Bacteroidetes_40_43 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
guanylate cyclase
Tax=CG_Ignavi_02
anamox1_curated_scaffold_1243_5
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(6109..8292)
DNA (2184bp) protein (728aa)
Uncharacterized protein bin=GWF2_Bacteroidetes_33_16 species=Microcystis aeruginosa genus=Microcystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
peptidase C14 caspase catalytic subunit p20
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
anamox1_curated_scaffold_1243_6
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(8352..9170)
DNA (819bp) protein (273aa)
Enoyl-(acyl-carrier-protein) reductase (NADH) (EC:1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094, ECO:0000313|EMBL:CCG99648.1};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
enoyl-ACP reductase Tax=Spirosoma panaciterrae RepID=UPI000380B948
anamox1_curated_scaffold_1243_7
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9270..10922)
DNA (1653bp) protein (551aa)
DNA repair protein RecN Tax=Alistipes indistinctus YIT 12060 RepID=G5H9E6_9BACT
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
DNA replication and repair protein RecN
anamox1_curated_scaffold_1243_8
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(10984..11892)
DNA (909bp) protein (303aa)
hypothetical protein Tax=Pedobacter arcticus RepID=UPI0002DDC13F
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
anamox1_curated_scaffold_1243_9
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11882..13108)
DNA (1227bp) protein (409aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase Tax=Odoribacter sp. CAG:788 RepID=R5NWL3_9PORP
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase {ECO:0000313|EMBL:CCZ08258.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
phosphopantothenoylcysteine decarboxylase
anamox1_curated_scaffold_1243_10
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(13128..13463)
DNA (336bp) protein (112aa)
hypothetical protein Tax=Anaerophaga thermohalophila RepID=UPI000237C88E
RNA polymerase Rpb6
DNA-directed RNA polymerase subunit omega {ECO:0000313|EMBL:AIZ63352.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
anamox1_curated_scaffold_1243_11
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(13460..14266)
DNA (807bp) protein (269aa)
putative lipoprotein bin=GWF2_Bacteroidetes_35_48 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
outer membrane assembly lipoprotein YfiO
Tax=GWF2_Bacteroidetes_35_48_curated
anamox1_curated_scaffold_1243_12
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14663..15907
DNA (1245bp) protein (415aa)
8-amino-7-oxononanoate synthase (EC:2.3.1.47)
8-amino-7-oxononanoate synthase Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBT6_FLUTR
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
anamox1_curated_scaffold_1243_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(15983..16381)
DNA (399bp) protein (133aa)
DoxX family protein Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J617_CYCMS bin=16ft_combo_ws3_JS1 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative transmembrane DoxX protein
Tax=RBG_16_RIF_WS3X_71_46_curated
anamox1_curated_scaffold_1243_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16562..17149
DNA (588bp) protein (196aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEH5_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99397.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_1243_15
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17374..19317
DNA (1944bp) protein (648aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Threonine--tRNA ligase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB66_CHIPD
thrS; threonyl-tRNA synthetase
anamox1_curated_scaffold_1243_16
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19428..19949
DNA (522bp) protein (174aa)
Translation initiation factor IF-3 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KW72_SOLCM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
translation initiation factor IF-3
anamox1_curated_scaffold_1243_17
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


20053..20244
DNA (192bp) protein (64aa)
50S ribosomal protein L35 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W5Z2_DYAFD
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
anamox1_curated_scaffold_1243_18
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


20345..20689
DNA (345bp) protein (115aa)
50S ribosomal protein L20 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AFX6_FLELS
50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
anamox1_curated_scaffold_1243_19
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20847..21482)
DNA (636bp) protein (212aa)
Exonuclease rnase t and DNA polymerase iii Tax=Pontibacter sp. BAB1700 RepID=J0V4L0_9BACT
Exonuclease rnase t and DNA polymerase iii {ECO:0000313|EMBL:EJF08997.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
exonuclease rnase t and DNA polymerase iii
anamox1_curated_scaffold_1243_20
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(21625..22518)
DNA (894bp) protein (298aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GW11_9SPHI
anamox1_curated_scaffold_1243_21
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(22528..22830)
DNA (303bp) protein (101aa)
Putative uncharacterized protein bin=GWF2_Bacteroidetes_33_38 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Displaying 21 items

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