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anamox1_curated_scaffold_1592

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1592_1

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1..120
DNA (120bp) protein (40aa)
hypothetical protein, partial Tax=Thiomonas sp. FB-6 RepID=UPI00035C6C79
Transposase, IS256 family {ECO:0000313|EMBL:CBH97319.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
IS256 family transposase
anamox1_curated_scaffold_1592_2
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(870..1169)
DNA (300bp) protein (100aa)
Transcriptional regulator, XRE family protein Tax=Marinobacter sp. ELB17 RepID=A3JC37_9ALTE
plasmid maintenance system antidote protein
Plasmid maintenance system antidote protein {ECO:0000313|EMBL:BAO84290.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
anamox1_curated_scaffold_1592_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1681..2415
DNA (735bp) protein (245aa)
Uncharacterized protein Tax=Rhodanobacter denitrificans RepID=I4WSF4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87440.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
anamox1_curated_scaffold_1592_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2429..3808)
DNA (1380bp) protein (460aa)
Signal transduction protein containing GAF and PtsI domains Tax=Rhodanobacter denitrificans RepID=M4NAF2_9GAMM
signal transduction protein containing GAF and PtsI domains
Signal transduction protein containing GAF and PtsI domains {ECO:0000313|EMBL:AGG87439.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
anamox1_curated_scaffold_1592_5
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3814..4308)
DNA (495bp) protein (165aa)
Uncharacterized protein Tax=Azoarcus sp. KH32C RepID=H0Q0E0_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL26738.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
anamox1_curated_scaffold_1592_6
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4374..5594)
DNA (1221bp) protein (407aa)
Drug resistance transporter Bcr/CflA subfamily protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LT44_9BURK
Multidrug transporter CflA {ECO:0000313|EMBL:KJA11833.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
bcr; bicyclomycin resistance protein Bcr
anamox1_curated_scaffold_1592_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6104..7483
DNA (1380bp) protein (460aa)
Voltage-gated chloride channel Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPD9_9GAMM
Voltage-gated chloride channel {ECO:0000313|EMBL:EIM01331.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
chloride channel protein EriC
anamox1_curated_scaffold_1592_8
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7517..8149
DNA (633bp) protein (211aa)
Lysine exporter protein (LYSE/YGGA) Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21ST4_RHOFD
lysine exporter protein LysE/YggA
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
anamox1_curated_scaffold_1592_9
Serratia proteamaculans, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8136..9164)
DNA (1029bp) protein (343aa)
hypothetical protein Tax=Cupriavidus sp. BIS7 RepID=UPI0002FFFFB2
fumarylacetoacetate (FAA) hydrolase
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:ABV41404.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia proteamaculans (strain 568).;"
anamox1_curated_scaffold_1592_10
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9161..9691)
DNA (531bp) protein (177aa)
Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 4 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HGI3_ACHXA
glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 4
Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 4 {ECO:0000313|EMBL:ADP14183.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
anamox1_curated_scaffold_1592_11
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9742..10476
DNA (735bp) protein (245aa)
Regulatory protein LuxR Tax=Nitratireductor pacificus pht-3B RepID=K2N1P0_9RHIZ
LuxR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1592_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10545..12149
DNA (1605bp) protein (535aa)
Monooxygenase FAD-binding Tax=Variovorax paradoxus (strain S110) RepID=C5CQD5_VARPS
FAD-binding monooxygenase
Monooxygenase FAD-binding {ECO:0000313|EMBL:ACS21707.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
anamox1_curated_scaffold_1592_13
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12267..13139)
DNA (873bp) protein (291aa)
htpX; putative protease HtpX (EC:3.4.24.-)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Protease HtpX homolog Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMP3_RUBGI
anamox1_curated_scaffold_1592_14
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13273..14319)
DNA (1047bp) protein (349aa)
pyrC; dihydroorotase PyrC (EC:3.5.2.3)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00219};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Dihydroorotase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMP1_RUBGI
anamox1_curated_scaffold_1592_15
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14360..15304)
DNA (945bp) protein (315aa)
LysR family transcriptional regulator Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTX2_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:EGJ11790.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
LysR family transcriptional regulator
anamox1_curated_scaffold_1592_16
unknown

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15344..15715
DNA (372bp) protein (124aa)

This feature has no annotations

anamox1_curated_scaffold_1592_17

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15727..17163
DNA (1437bp) protein (479aa)
Long-chain-alcohol oxidase Tax=Oryza sativa subsp. indica RepID=B8BHG1_ORYSI
Uncharacterized protein {ECO:0000313|EMBL:AKA48411.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
oxidoreductase
anamox1_curated_scaffold_1592_18
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(17225..19066)
DNA (1842bp) protein (614aa)
ABC transporter permease/ATP-binding protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMN3_RUBGI
ABC transporter permease/ATP-binding protein
ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:BAL94270.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1592_19
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19110..19541
DNA (432bp) protein (144aa)
thioesterase superfamily protein (EC:3.1.2.-)
Acyl-CoA hydrolase-like protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTX0_9BURK
Acyl-CoA hydrolase-like protein {ECO:0000313|EMBL:EGJ11788.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1592_20
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(19589..20272)
DNA (684bp) protein (228aa)
hypothetical protein Tax=Brachymonas chironomi RepID=UPI00037C26E7
Molybdenum cofactor sulfurase {ECO:0000313|EMBL:ESJ19886.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
MOSC-domain-containing protein
anamox1_curated_scaffold_1592_21
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(20289..21065)
DNA (777bp) protein (259aa)
paaG; enoyl-CoA hydratase/isomerase (EC:4.2.1.17)
Enoyl-CoA hydratase/carnithine racemase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WUI2_9BURK
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:EHR69408.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_1592_22
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(21088..22287)
DNA (1200bp) protein (400aa)
fadA; thiolase family protein FadA (EC:2.3.1.16)
Thiolase family protein FadA {ECO:0000313|EMBL:BAL94258.1}; EC=2.3.1.16 {ECO:0000313|EMBL:BAL94258.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Thiolase family protein FadA Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMM1_RUBGI
anamox1_curated_scaffold_1592_23
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(22304..24415)
DNA (2112bp) protein (704aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WUI0_9BURK
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EHR69406.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Displaying 23 items

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