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anamox1_curated_scaffold_19386

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_19386_1
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..1079)
DNA (1077bp) protein (359aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
rpoB; DNA-directed RNA polymerase subunit beta RpoB (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta Tax=Ideonella sp. B508-1 RepID=UPI00034BA1A2
anamox1_curated_scaffold_19386_2
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1373..1753)
DNA (381bp) protein (127aa)
50S ribosomal protein L7/L12 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HKX7_RUBGI
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_19386_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1824..2333)
DNA (510bp) protein (170aa)
50S ribosomal protein L10 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HKX6_RUBGI
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_19386_4
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2555..3277)
DNA (723bp) protein (241aa)
50S ribosomal protein L1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HKX5_RUBGI
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_19386_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3280..3711)
DNA (432bp) protein (144aa)
50S ribosomal protein L11 Tax=Rubrivivax RepID=I0HKX4_RUBGI
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_19386_6
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3825..4415)
DNA (591bp) protein (197aa)
transcription antitermination protein NusG Tax=Ideonella sp. B508-1 RepID=UPI00034BF734
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
nusG; transcriptional antiterminator NusG
anamox1_curated_scaffold_19386_7
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4432..4818)
DNA (387bp) protein (129aa)
Preprotein translocase subunit SecE Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLV5_9BURK
secE; preprotein translocase subunit SecE
Preprotein translocase subunit SecE {ECO:0000313|EMBL:EGJ09323.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_19386_trna_1
unknown

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comp(4921..4993)
DNA (73bp)
transferRNA Trp
anamox1_curated_scaffold_19386_8
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5094..5513)
DNA (420bp) protein (140aa)
Elongation factor Tu Tax=Thiomonas intermedia (strain K12) RepID=D5X012_THIK1
tuf; Elongation factor Tu (EF-Tu) (P-43)
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Displaying 9 items

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