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anamox1_curated_scaffold_813

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_813_1

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205..975
DNA (771bp) protein (257aa)
Putative exodeoxyribonuclease III {ECO:0000313|EMBL:CBH98127.1}; EC=3.1.11.2 {ECO:0000313|EMBL:CBH98127.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
exodeoxyribonuclease III Tax=Caldimonas manganoxidans RepID=UPI00036A7045
exodeoxyribonuclease III Xth
anamox1_curated_scaffold_813_2
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1010..2479)
DNA (1470bp) protein (490aa)
Nitrogen metabolism transcriptional regulator NtrC Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP44_RUBGI
ntrC; nitrogen metabolism transcriptional regulator NtrC
Nitrogen metabolism transcriptional regulator, NtrC, Fis family protein {ECO:0000313|EMBL:EGJ12013.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_813_3
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2509..3621)
DNA (1113bp) protein (371aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
ntrB; signal transduction histidine kinase, nitrogen specific, NtrB (EC:2.7.13.3)
Signal transduction histidine kinase, nitrogen specific, NtrB Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP43_RUBGI
anamox1_curated_scaffold_813_4
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3618..4187)
DNA (570bp) protein (190aa)
Putative uncharacterized protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WHP8_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_813_5
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4297..5712)
DNA (1416bp) protein (472aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
glnA; glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WHP7_9BURK
anamox1_curated_scaffold_813_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5891..6709)
DNA (819bp) protein (273aa)
Putative nuleotide-utilizing enzyme, moeA Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WHP6_9BURK
Putative nuleotide-utilizing enzyme, moeA {ECO:0000313|EMBL:EHR70308.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
molybdopterin-binding domain-containing protein
anamox1_curated_scaffold_813_7
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6706..7530)
DNA (825bp) protein (275aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUJ0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ12008.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_813_8
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7578..8390)
DNA (813bp) protein (271aa)
hypothetical protein Tax=Curvibacter lanceolatus RepID=UPI000371CCAF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM95174.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
anamox1_curated_scaffold_813_9
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8542..9735
DNA (1194bp) protein (398aa)
Hippurate hydrolase Tax=Burkholderia phenoliruptrix BR3459a RepID=K0DPJ3_9BURK
amidohydrolase family protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_813_10
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9775..11037)
DNA (1263bp) protein (421aa)
Saccharopine dehydrogenase Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y1S1_9RHOO
Saccharopine dehydrogenase {ECO:0000313|EMBL:ENO85470.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
saccharopine dehydrogenase
anamox1_curated_scaffold_813_11
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11074..12171)
DNA (1098bp) protein (366aa)
Carboxynorspermidine/carboxyspermidine decarboxylase {ECO:0000256|PIRNR:PIRNR038941}; Short=CANS DC/CAS DC {ECO:0000256|PIRNR:PIRNR038941};; Short=CANSDC/CASDC {ECO:0000256|PIRNR:PIRNR038941};; EC=4.1.1.96 {ECO:0000256|PIRNR:PIRNR038941};; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
Carboxynorspermidine/carboxyspermidine decarboxylase Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6XUR3_9RHOO
nspC; carboxynorspermidine decarboxylase
anamox1_curated_scaffold_813_12
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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12630..13307
DNA (678bp) protein (226aa)
Putative nitroreductase Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QLR9_DESAH
putative nitroreductase
Putative nitroreductase {ECO:0000313|EMBL:ACN16373.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2).;"
anamox1_curated_scaffold_813_13
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13312..14640
DNA (1329bp) protein (443aa)
aminotransferase class III Tax=Dyella ginsengisoli RepID=UPI00036D5257
Aminotransferase class-III {ECO:0000313|EMBL:KGQ20088.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
anamox1_curated_scaffold_813_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14656..16230
DNA (1575bp) protein (525aa)
aldehyde dehydrogenase Tax=Dyella ginsengisoli RepID=UPI00034BC0A0
Aldehyde dehydrogenase {ECO:0000313|EMBL:EIL99518.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
NAD-dependent aldehyde dehydrogenase
anamox1_curated_scaffold_813_15
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16355..19705
DNA (3351bp) protein (1117aa)
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
recC; exodeoxyribonuclease V gamma chain RecC (EC:3.1.11.5)
Exodeoxyribonuclease V gamma chain RecC Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HVQ4_RUBGI
anamox1_curated_scaffold_813_16
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19702..23364
DNA (3663bp) protein (1221aa)
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
recB; exodeoxyribonuclease V beta chain RecB (EC:3.1.11.5)
Exodeoxyribonuclease V beta chain RecB Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HVQ5_RUBGI
anamox1_curated_scaffold_813_17
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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23361..25286
DNA (1926bp) protein (642aa)
recD; exodeoxyribonuclease V alpha chain RecD (EC:3.1.11.5)
Exodeoxyribonuclease V alpha chain RecD Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HVQ6_RUBGI
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_813_18
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25283..26413
DNA (1131bp) protein (377aa)
Metallophosphoesterase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LT01_9BURK
Metallophosphoesterase {ECO:0000313|EMBL:EGJ11469.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
exonuclease SbcD
anamox1_curated_scaffold_813_19
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26410..29121
DNA (2712bp) protein (904aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HVQ8_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL97095.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_813_20
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(29153..29722)
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TWQ7_TISMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK57195.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
anamox1_curated_scaffold_813_21
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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30062..31240
DNA (1179bp) protein (393aa)
benzoyl coA reductase subunit C bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
2-hydroxyglutaryl-CoA dehydratase subunit D
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
anamox1_curated_scaffold_813_22
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31259..32008
DNA (750bp) protein (250aa)
benzoyl coA reductase subunit B bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
2-hydroxyglutaryl-CoA dehydratase subunit D
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
Displaying 22 items

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