ggKbase | organisms

Consensus taxonomy: Planctomycetia → Planctomycetes → Bacteria

Metagenomic Context

Parent: anamox1_Planctomycetia_64_8 Manually curated genome
Original version: anamox1_Planctomycetia_64_8

Properties

Avg. coverage: 1.00 Longest contig: 35.63 Kbp Bin length: 4.14 Mbp GC content: 63.58 %

Contigs count: 783 Features count: 3420 rRNAs count: 0 tRNAs count: 20

Genome completeness

near complete RP 45 / 55 MC: 3 BSCG 43 / 51 MC: 2 ASCG 10 / 38 MC: 1

Displaying items 501-550 of 783 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
anamox1_curated_scaffold_47763 Species: Rhodopirellula sp. SWK7 (50%)	2	1156 bp	54.07	1.00	79.93
anamox1_curated_scaffold_16811 Species: RBG_16_Planctomycetes_64_12_curated (50%)	2	2842 bp	64.36	1.00	67.03
anamox1_curated_scaffold_40621 Species: bacterium UASB270 (50%)	2	1582 bp	67.51	1.00	100.51
anamox1_curated_scaffold_11948 Species: Blastopirellula marina (50%)	2	3858 bp	63.32	1.00	59.18
anamox1_curated_scaffold_17815 Species: Singulisphaera acidiphila (100%)	2	2835 bp	61.80	1.00	81.59
anamox1_curated_scaffold_22583 Species: Blastopirellula marina (50%)	2	2245 bp	64.32	1.00	86.06
anamox1_curated_scaffold_19062 Species: Pirellula staleyi (100%)	2	2207 bp	64.48	1.00	74.90
anamox1_curated_scaffold_7435 Species: Pirellula staleyi (50%)	2	5524 bp	63.03	1.00	91.89
anamox1_curated_scaffold_84960 Species: RBG_16_Planctomycetes_64_12_curated (50%)	2	1422 bp	64.14	1.00	62.45
anamox1_curated_scaffold_6885 Species: Pirellula staleyi (50%)	2	5844 bp	64.61	1.00	91.17
anamox1_curated_scaffold_12649 Species: Pirellula staleyi (50%)	2	3727 bp	67.40	1.00	94.26
anamox1_curated_scaffold_36165 Species: Pirellula staleyi (50%)	2	1757 bp	58.91	1.00	59.08
anamox1_curated_scaffold_14568 Species: marine sediment metagenome (50%)	2	2838 bp	62.40	1.00	66.70
anamox1_curated_scaffold_48539 Species: RBG_16_Planctomycetes_64_12_curated (100%)	2	1498 bp	63.22	1.00	60.48
anamox1_curated_scaffold_38954 Species: Pirellula staleyi (50%)	2	1609 bp	60.72	1.00	22.37
anamox1_curated_scaffold_20436 Species: Blastopirellula marina (50%)	2	2520 bp	62.58	1.00	85.83
anamox1_curated_scaffold_54958 Species: Blastopirellula marina (50%)	2	1058 bp	60.49	1.00	91.02
anamox1_curated_scaffold_25270 Species: Pirellula staleyi (50%)	2	2281 bp	62.56	1.00	95.75
anamox1_curated_scaffold_23737 Species: Pirellula staleyi (50%)	2	2101 bp	65.06	1.00	80.68
anamox1_curated_scaffold_42403 Species: Rhodopirellula europaea (50%)	2	1278 bp	62.60	1.00	96.48
anamox1_curated_scaffold_24955 Species: RBG_16_Planctomycetes_64_12_curated (50%)	2	2031 bp	67.16	1.00	97.19
anamox1_curated_scaffold_52182 Species: RBG_16_Planctomycetes_64_10_curated (50%)	2	1644 bp	63.87	1.00	80.29
anamox1_curated_scaffold_36478 Species: CG_Arma_01 (50%)	2	1720 bp	61.92	1.00	64.53
anamox1_curated_scaffold_35120 Species: Rubinisphaera brasiliensis (50%)	2	1606 bp	64.57	1.00	67.62
anamox1_curated_scaffold_31781 Species: RBG_16_Planctomycetes_64_10_curated (50%)	2	1766 bp	63.93	1.00	85.79
anamox1_curated_scaffold_50363 Species: Singulisphaera acidiphila (100%)	2	1145 bp	61.92	1.00	87.51
anamox1_curated_scaffold_44131 Species: RBG_13_Planctomycetes_63_9_curated (50%)	2	1524 bp	62.86	1.00	69.69
anamox1_curated_scaffold_36445 Species: Pirellula staleyi (50%)	2	1509 bp	65.08	1.00	100.20
anamox1_curated_scaffold_18259 Species: Pirellula staleyi (100%)	2	2480 bp	64.11	1.00	84.80
anamox1_curated_scaffold_31110 Species: Rhodopirellula baltica (50%)	2	1695 bp	63.66	1.00	69.73
anamox1_curated_scaffold_15763 Species: RBG_16_Planctomycetes_64_12_curated (50%)	2	2924 bp	63.20	1.00	99.21
anamox1_curated_scaffold_31410 Species: RBG_13_Planctomycetes_63_9_curated (50%)	2	1905 bp	63.15	1.00	81.89
anamox1_curated_scaffold_47951 Species: RBG_16_Planctomycetes_64_10_curated (50%)	2	1411 bp	62.30	1.00	85.68
anamox1_curated_scaffold_18121 Species: marine sediment metagenome (50%)	2	2628 bp	58.37	1.00	14.50
anamox1_curated_scaffold_12959 Species: Pirellula staleyi (50%)	2	3126 bp	63.44	1.00	70.25
anamox1_curated_scaffold_80195 Species: Pirellula staleyi (100%)	2	1081 bp	66.79	1.00	94.63
anamox1_curated_scaffold_48957 Species: RBG_16_Planctomycetes_64_10_curated (100%)	2	1702 bp	65.16	1.00	71.39
anamox1_curated_scaffold_29512 Species: Pirellula staleyi (100%)	2	1779 bp	63.24	1.00	89.04
anamox1_curated_scaffold_12665 Species: Gimesia maris (50%)	2	3832 bp	63.23	1.00	70.54
anamox1_curated_scaffold_18839 Species: RBG_16_Planctomycetes_64_12_curated (50%)	2	2365 bp	64.10	1.00	84.86
anamox1_curated_scaffold_15449 Species: Pirellula staleyi (50%)	2	2951 bp	60.89	1.00	53.68
anamox1_curated_scaffold_20028 Species: Pirellula staleyi (100%)	2	2601 bp	64.44	1.00	100.12
anamox1_curated_scaffold_48280 Species: Gimesia maris (50%)	2	1210 bp	62.98	1.00	85.29
anamox1_curated_scaffold_60132 Species: Pirellula staleyi (50%)	2	1184 bp	63.26	1.00	86.15
anamox1_curated_scaffold_35352 Species: RBG_16_Planctomycetes_64_12_curated (50%)	2	1974 bp	64.69	1.00	77.05
anamox1_curated_scaffold_38317 Species: Pirellula staleyi (100%)	2	1761 bp	66.16	1.00	100.17
anamox1_curated_scaffold_12332 Species: Pirellula staleyi (100%)	2	3810 bp	65.67	1.00	68.58
anamox1_curated_scaffold_9458 Species: Singulisphaera acidiphila (50%)	2	4237 bp	59.10	1.00	76.26
anamox1_curated_scaffold_32999 Species: Pirellula staleyi (50%)	2	1421 bp	64.74	1.00	55.52
anamox1_curated_scaffold_33799 Species: Methylococcus capsulatus (50%)	2	1646 bp	63.49	1.00	99.33

Displaying items 501-550 of 783 in total

anamox1_Planctomycetia_64_8_curated

anamox1_Planctomycetia_64_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

anamox1_Planctomycetia_64_8_curated

anamox1_Planctomycetia_64_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

Terms of Service

Search Help