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anamox1_curated_scaffold_1228

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Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1228_1
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..157)
DNA (156bp) protein (52aa)
Putative uncharacterized protein Tax=Xanthomonas oryzae pv. oryzicola BLS256 RepID=G7TCM5_9XANT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ96203.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae pv. oryzicola (strain BLS256).;"
anamox1_curated_scaffold_1228_2
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154..759)
DNA (606bp) protein (202aa)
hypothetical protein Tax=Acidovorax sp. MR-S7 RepID=UPI000372A930
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
anamox1_curated_scaffold_1228_3
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1070..1546)
DNA (477bp) protein (159aa)
hypothetical protein Tax=Limnohabitans sp. Rim47 RepID=UPI00037BEC6E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34659.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
anamox1_curated_scaffold_1228_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1841..2389)
DNA (549bp) protein (183aa)
Cytochrome B561 Tax=Rhodanobacter denitrificans RepID=M4NIN0_9GAMM
cytochrome B561
Cytochrome B561 {ECO:0000313|EMBL:AGG89952.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
anamox1_curated_scaffold_1228_5
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2424..3548)
DNA (1125bp) protein (375aa)
ABC transporter; K09686 antibiotic transport system permease protein bin=CNBR_ACIDO species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter permease
ABC transporter inner membrane permease YbhR {ECO:0000313|EMBL:AEI07778.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
anamox1_curated_scaffold_1228_6
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3552..4724)
DNA (1173bp) protein (391aa)
Putative ABC transporter permease Tax=Rhodanobacter denitrificans RepID=I4WYP3_9GAMM
ABC-type multidrug transport system, permease component
ABC-2 type transporter {ECO:0000313|EMBL:ABQ70053.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
anamox1_curated_scaffold_1228_7
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4721..6460)
DNA (1740bp) protein (580aa)
ABC transporter related Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCN6_SPHWW
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABQ70052.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
anamox1_curated_scaffold_1228_8
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6462..7478)
DNA (1017bp) protein (339aa)
Efflux pump membrane fusion protein Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WYK3_PSEDE
Secretion protein HlyD {ECO:0000313|EMBL:KIL02545.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
efflux pump membrane fusion protein
anamox1_curated_scaffold_1228_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7489..8100)
DNA (612bp) protein (204aa)
TetR family transcriptional regulator Tax=Pseudomonas RepID=M4XEQ7_PSEDE
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:KIL02543.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
anamox1_curated_scaffold_1228_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8207..8932
DNA (726bp) protein (242aa)
phosphatase Tax=Dyella ginsengisoli RepID=UPI0003687D98
haloacid dehalogenase superfamily protein, phosphoserine phosphatase/2,3-diketo-5-methylthio-1-phosphopentane phosphatase
Haloacid dehalogenase superfamily protein, phosphoserine phosphatase/2,3-diketo-5-methylthio-1-phosphopentane phosphatase {ECO:0000313|EMBL:AGG88240.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
anamox1_curated_scaffold_1228_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8964..10370
DNA (1407bp) protein (469aa)
adenosylmethionine-8-amino-7-oxononanoate aminotransferase Tax=Dyella ginsengisoli RepID=UPI000346863F
Class III aminotransferase {ECO:0000313|EMBL:EIL94716.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
4-aminobutyrate aminotransferase family protein
anamox1_curated_scaffold_1228_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10394..10669
DNA (276bp) protein (92aa)
hypothetical protein Tax=Dyella ginsengisoli RepID=UPI00034CAE0F
Acyl carrier protein {ECO:0000313|EMBL:EIL97092.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
acyl carrier protein
anamox1_curated_scaffold_1228_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10669..11895
DNA (1227bp) protein (409aa)
beta-ketoacyl synthase Tax=Dyella ginsengisoli RepID=UPI000346569C
Uncharacterized protein {ECO:0000313|EMBL:EIM01933.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
3-oxoacyl-(acyl-carrier-protein) synthase
anamox1_curated_scaffold_1228_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11928..12995
DNA (1068bp) protein (356aa)
hypothetical protein Tax=Dyella ginsengisoli RepID=UPI00034D9CB9
Uncharacterized protein {ECO:0000313|EMBL:EIM01935.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
anamox1_curated_scaffold_1228_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12992..13870
DNA (879bp) protein (293aa)
hypothetical protein Tax=Dyella ginsengisoli RepID=UPI0003471664
Arginase family
Arginase family {ECO:0000313|EMBL:AGG88246.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
anamox1_curated_scaffold_1228_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13908..15116)
DNA (1209bp) protein (403aa)
hypothetical protein Tax=Dyella ginsengisoli RepID=UPI00034B0DDC
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis {ECO:0000313|EMBL:AGG88248.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
anamox1_curated_scaffold_1228_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15123..15512)
DNA (390bp) protein (130aa)
membrane protein Tax=Dyella ginsengisoli RepID=UPI00034B13EF
Putative transmembrane protein {ECO:0000313|EMBL:EIL94723.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cation/cationic drug transporter
anamox1_curated_scaffold_1228_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15509..15862)
DNA (354bp) protein (118aa)
membrane protein Tax=Dyella ginsengisoli RepID=UPI00034B4358
Uncharacterized protein {ECO:0000313|EMBL:EIL94724.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
EamA-like transporter family
anamox1_curated_scaffold_1228_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15877..16713)
DNA (837bp) protein (279aa)
alpha/beta hydrolase Tax=Dyella ginsengisoli RepID=UPI00034C8DDD
esterase/lipase
Esterase/lipase {ECO:0000313|EMBL:AGG88251.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
anamox1_curated_scaffold_1228_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16742..17683)
DNA (942bp) protein (314aa)
hypothetical protein Tax=Dyella ginsengisoli RepID=UPI00034A6F94
Hemolysin D {ECO:0000313|EMBL:EIL94726.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
multidrug resistance efflux pump
anamox1_curated_scaffold_1228_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17696..18439)
DNA (744bp) protein (248aa)
ABC transporter, partial Tax=Dyella ginsengisoli RepID=UPI000373D3D2
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:AGG88253.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
anamox1_curated_scaffold_1228_22
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18436..19569)
DNA (1134bp) protein (378aa)
ABC transporter permease, partial Tax=Dyella ginsengisoli RepID=UPI00037AF7D8
Uncharacterized protein {ECO:0000313|EMBL:EIL98914.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC transporter permease
anamox1_curated_scaffold_1228_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19569..20255)
DNA (687bp) protein (229aa)
hypothetical protein Tax=Dyella ginsengisoli RepID=UPI000347F91C
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGG88255.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
anamox1_curated_scaffold_1228_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20988..22463)
DNA (1476bp) protein (492aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein Tax=Dyella ginsengisoli RepID=UPI00034ADFC9
signal transduction histidine kinase
anamox1_curated_scaffold_1228_25
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22456..23130)
DNA (675bp) protein (225aa)
transcriptional regulator Tax=Dyella ginsengisoli RepID=UPI00034B32F5
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHX12370.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
anamox1_curated_scaffold_1228_26
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23350..23904)
DNA (555bp) protein (185aa)
Ni2CFe-hydrogenase I cytochrome b subunit Tax=gamma proteobacterium IMCC2047 RepID=F3KE30_9GAMM
prokaryotic cytochrome b561 family protein
Prokaryotic cytochrome b561 family protein {ECO:0000313|EMBL:AJZ56966.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
anamox1_curated_scaffold_1228_27
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23901..24188)
DNA (288bp) protein (96aa)
Uncharacterized protein Tax=Burkholderia sp. Ch1-1 RepID=I2IMY1_9BURK
peptidase propeptide and YPEB domain protein
Peptidase propeptide and YPEB domain protein {ECO:0000313|EMBL:AJZ56675.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
anamox1_curated_scaffold_1228_28
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24369..25034
DNA (666bp) protein (222aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain Tax=Burkholderia sp. Ch1-1 RepID=I2IMY0_9BURK
Regulator {ECO:0000313|EMBL:KIF82815.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein
anamox1_curated_scaffold_1228_29
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25031..26410
DNA (1380bp) protein (460aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
Integral membrane sensor signal transduction histidine kinase Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEB1_GALCS
integral membrane sensor signal transduction histidine kinase
anamox1_curated_scaffold_1228_trna_1
unknown

Not on your lists

26479..26551
DNA (73bp)
transferRNA Arg
Displaying items 1-30 of 65 in total

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