ggKbase home page

anamox1_curated_scaffold_1871

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1871_1
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..355)
DNA (354bp) protein (118aa)
Putative fatty-acid--CoA ligase Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YNQ9_9SPHN
Putative fatty-acid--CoA ligase {ECO:0000313|EMBL:GAD50495.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
AMP-dependent synthetase
anamox1_curated_scaffold_1871_2
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(362..1384)
DNA (1023bp) protein (341aa)
Putative oxidoreductase Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYN3_9SPHN
Putative oxidoreductase {ECO:0000313|EMBL:GAD50494.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
luciferase-like protein
anamox1_curated_scaffold_1871_3
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1418..2284)
DNA (867bp) protein (289aa)
3-oxoacyl-(Acyl-carrier-protein) reductase FabG {ECO:0000313|EMBL:KJF20707.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KJF20707.1};; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AD45.;"
short-chain dehydrogenase Tax=Frankia sp. BMG5.12 RepID=UPI00036A8380
short-chain dehydrogenase/reductase SDR
anamox1_curated_scaffold_1871_4
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2281..4677)
DNA (2397bp) protein (799aa)
glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase (EC:1.1.5.8)
Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family {ECO:0000313|EMBL:AEG50875.1}; EC=1.1.5.8 {ECO:0000313|EMBL:AEG50875.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum L-1.;"
Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family Tax=Sphingobium chlorophenolicum L-1 RepID=F6F363_SPHCR
anamox1_curated_scaffold_1871_5
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4677..7004)
DNA (2328bp) protein (776aa)
TonB-dependent receptor Tax=Sphingomonas sp. KC8 RepID=UPI000248A3AC
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ABQ69658.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
anamox1_curated_scaffold_1871_6
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(7146..7844)
DNA (699bp) protein (233aa)
Tax=RBG_13_Chloroflexi_54_8_curated
anamox1_curated_scaffold_1871_7
gamma proteobacterium IMCC3088, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7897..8673
DNA (777bp) protein (259aa)
Short-chain dehydrogenase/reductase SDR Tax=gamma proteobacterium IMCC3088 RepID=F3L4R2_9GAMM
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EGG28710.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteobacterium IMCC3088.;"
short-chain dehydrogenase/reductase SDR
anamox1_curated_scaffold_1871_8
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8699..9505)
DNA (807bp) protein (269aa)
Short chain dehydrogenase Tax=Comamonas testosteroni ATCC 11996 RepID=H1RWM4_COMTE
Short chain dehydrogenase {ECO:0000313|EMBL:EHN63261.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni ATCC 11996.;"
putative oxidoreductase
anamox1_curated_scaffold_1871_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(9505..10413)
DNA (909bp) protein (303aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036B5433
phophoslipid binding protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
anamox1_curated_scaffold_1871_10
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10469..12031)
DNA (1563bp) protein (521aa)
Uncharacterized protein Tax=Thauera terpenica 58Eu RepID=T0APH5_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ14759.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
Twin-arginine translocation pathway signal
anamox1_curated_scaffold_1871_11
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12121..13224
DNA (1104bp) protein (368aa)
Uncharacterized protein Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RN31_MYCRN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV76225.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
anamox1_curated_scaffold_1871_12
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13255..14988
DNA (1734bp) protein (578aa)
Putative fatty-acid--CoA ligase Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y373_9SPHN
Putative fatty-acid--CoA ligase {ECO:0000313|EMBL:GAD47396.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
AMP-dependent synthetase and ligase
anamox1_curated_scaffold_1871_13
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14994..15434
DNA (441bp) protein (147aa)
ketosteroid isomerase Tax=Spongiibacter tropicus RepID=UPI0003B53636
Uncharacterized protein {ECO:0000313|EMBL:EIF43574.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
ketosteroid isomerase
anamox1_curated_scaffold_1871_14
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15466..16188)
DNA (723bp) protein (241aa)
Uncharacterized protein Tax=Ralstonia sp. AU12-08 RepID=S9T7G5_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EPX94619.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
hypothetical protein
anamox1_curated_scaffold_1871_15
unknown

Not on your lists

comp(16212..16286)
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 15 items

View Taxonomy