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anamox1_curated_scaffold_1954

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1954_1

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3..290
DNA (288bp) protein (96aa)
IstB domain protein ATP-binding protein (Fragment) Tax=mine drainage metagenome RepID=T0Y677_9ZZZZ
IstB domain protein ATP-binding protein {ECO:0000313|EMBL:EQD28623.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
IstB domain-containing protein ATP-binding protein
anamox1_curated_scaffold_1954_2
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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326..925
DNA (600bp) protein (200aa)
Uncharacterized protein Tax=Ralstonia pickettii DTP0602 RepID=U3QS35_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW92081.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
anamox1_curated_scaffold_1954_3
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1129..1362
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=Oceanibaculum indicum P24 RepID=K2J9X1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE67284.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
anamox1_curated_scaffold_1954_4
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1359..1694
DNA (336bp) protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:EZP73618.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
anamox1_curated_scaffold_1954_5
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1788..4283
DNA (2496bp) protein (832aa)
hypothetical protein Tax=Legionella shakespearei RepID=UPI0003629C85
Uncharacterized protein {ECO:0000313|EMBL:KFL36715.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
hypothetical protein
anamox1_curated_scaffold_1954_6
unknown

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4283..4603
DNA (321bp) protein (107aa)

This feature has no annotations

anamox1_curated_scaffold_1954_7
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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4765..5448
DNA (684bp) protein (228aa)
Uncharacterized protein Tax=Thauera aminoaromatica S2 RepID=N6YZP5_9RHOO
hypothetical protein
Tax=GWA2_Gallionellales_59_43_curated
anamox1_curated_scaffold_1954_8
unknown

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comp(5398..5583)
DNA (186bp) protein (62aa)

This feature has no annotations

anamox1_curated_scaffold_1954_9
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5939..6532
DNA (594bp) protein (198aa)
hypothetical protein Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003686733
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY42808.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
anamox1_curated_scaffold_1954_10

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6557..7480
DNA (924bp) protein (308aa)
Acid phosphatase {ECO:0000256|PIRNR:PIRNR000897}; EC=3.1.3.2 {ECO:0000256|PIRNR:PIRNR000897};; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PhoC Tax=uncultured bacterium RepID=Q2PT43_9BACT
acid phosphatase
anamox1_curated_scaffold_1954_11
unknown

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7495..7635
DNA (141bp) protein (47aa)

This feature has no annotations

anamox1_curated_scaffold_1954_12
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7610..8110
DNA (501bp) protein (167aa)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
thiol peroxidase bin=CNBR_ACIDO species=Streptomyces cattleya genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
tpx; thiol peroxidase
anamox1_curated_scaffold_1954_13
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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8203..8454
DNA (252bp) protein (84aa)
hypothetical protein bin=BDI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=CG_Rhodocyc_01
anamox1_curated_scaffold_1954_14
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8491..8970
DNA (480bp) protein (160aa)
BadM/Rrf2 family transcriptional regulator Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUM5_9BURK
BadM/Rrf2 family transcriptional regulator {ECO:0000313|EMBL:EGJ12043.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
BadM/Rrf2 family transcriptional regulator
anamox1_curated_scaffold_1954_15
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9105..11120
DNA (2016bp) protein (672aa)
hypothetical protein Tax=Janthinobacterium sp. CG3 RepID=UPI00034D7719
TonB-dependent receptor {ECO:0000313|EMBL:KHA78598.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
TonB-dependent outer membrane receptor
anamox1_curated_scaffold_1954_16
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11143..11685
DNA (543bp) protein (181aa)
Molybdopterin binding oxidoreductase Tax=Janthinobacterium sp. HH01 RepID=L9PCR1_9BURK
Molybdopterin binding oxidoreductase {ECO:0000313|EMBL:ELX09460.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
putative uncharacterized protein
anamox1_curated_scaffold_1954_17
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11690..12214
DNA (525bp) protein (175aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI00031C000D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23231.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
anamox1_curated_scaffold_1954_18
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12222..13016
DNA (795bp) protein (265aa)
type 11 methyltransferase Tax=Acidovorax sp. MR-S7 RepID=UPI0003748A29
SAM-dependent methyltransferases {ECO:0000313|EMBL:GAD23972.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
type 11 methyltransferase
anamox1_curated_scaffold_1954_19
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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13025..13858
DNA (834bp) protein (278aa)
Transcriptional regulator, ModE family Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IYX2_PSEUL
ModE family transcriptional regulator
Transcriptional regulator, ModE family {ECO:0000313|EMBL:BAK75725.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
anamox1_curated_scaffold_1954_20
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13872..14588)
DNA (717bp) protein (239aa)
MOSC domain-containing protein Tax=Azospirillum sp. (strain B510) RepID=D3P312_AZOS1
Molybdenum cofactor sulfurase {ECO:0000313|EMBL:KJR64306.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
MOSC domain-containing protein
anamox1_curated_scaffold_1954_21
Burkholderia oklahomensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14585..15739)
DNA (1155bp) protein (385aa)
hypothetical protein Tax=Burkholderia oklahomensis RepID=UPI00016A26E6
polymer-forming cytoskeletal family protein
Polymer-forming cytoskeletal family protein {ECO:0000313|EMBL:AIO67656.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia oklahomensis.;"
Displaying 21 items

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