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anamox1_curated_scaffold_3690

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_3690_1
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..936
DNA (936bp) protein (312aa)
Transposase, IS4 family Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12AI7_POLSJ
IS4 family transposase
Transposase, IS4 family {ECO:0000313|EMBL:ABE44455.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
anamox1_curated_scaffold_3690_2
unknown

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comp(1368..1739)
DNA (372bp) protein (124aa)

This feature has no annotations

anamox1_curated_scaffold_3690_trna_1
unknown

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comp(1850..1920)
DNA (71bp)
transferRNA Gln
anamox1_curated_scaffold_3690_3
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1959..2354)
DNA (396bp) protein (132aa)
30S ribosomal protein S9 Tax=Dyella ginsengisoli RepID=UPI00034C35A5
rpsI; 30S ribosomal protein S9
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
anamox1_curated_scaffold_3690_4
Plesiomonas shigelloides, Plesiomonas, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2366..2794)
DNA (429bp) protein (143aa)
50S ribosomal protein L13 Tax=Plesiomonas shigelloides 302-73 RepID=R8ATA3_PLESH
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Plesiomonas.;" source="Plesiomonas shigelloides 302-73.;"
50S ribosomal protein L13
anamox1_curated_scaffold_3690_5

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2995..3732
DNA (738bp) protein (246aa)
Transcriptional regulator, Crp/Fnr family (Fragment) Tax=mine drainage metagenome RepID=T1CF35_9ZZZZ
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EQD80223.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Crp/Fnr family transcriptional regulator
anamox1_curated_scaffold_3690_6
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3737..4405)
DNA (669bp) protein (223aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
Ribulose-phosphate 3-epimerase Tax=Cycloclasticus sp. PY97M RepID=S2UXH5_9GAMM
rpe; ribulose-phosphate 3-epimerase
anamox1_curated_scaffold_3690_7

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comp(4438..5220)
DNA (783bp) protein (261aa)
Dna-J like membrane chaperone protein Tax=mine drainage metagenome RepID=T1BCW6_9ZZZZ
Dna-J like membrane chaperone protein {ECO:0000313|EMBL:EQD67667.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
djlA; Dna-J like membrane chaperone protein
anamox1_curated_scaffold_3690_8
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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5246..6142
DNA (897bp) protein (299aa)
phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000255|HAMAP-Rule:MF_00137}; EC=6.3.2.6 {ECO:0000255|HAMAP-Rule:MF_00137};; SAICAR synthetase {ECO:0000255|HAMAP-Rule:MF_00137}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
phosphoribosylaminoimidazole-succinocarboxamide synthase Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000382351A
anamox1_curated_scaffold_3690_9
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6176..7183)
DNA (1008bp) protein (336aa)
Cytochrome c551 peroxidase bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Oceanimonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
cytochrome c551 peroxidase
Tax=GWF1_Xanthomonadales_69_6_curated
anamox1_curated_scaffold_3690_10

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7479..8786
DNA (1308bp) protein (436aa)
Ribonuclease BN {ECO:0000313|EMBL:EQD61824.1}; EC=3.1.-.- {ECO:0000313|EMBL:EQD61824.1};; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein Tax=Thioalkalivibrio sp. ALJ24 RepID=UPI0003749B24
ribonuclease BN
anamox1_curated_scaffold_3690_11
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8800..9306)
DNA (507bp) protein (169aa)
Microcin-processing peptidase 1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0ABM0_ALKEH
microcin-processing peptidase 1
Microcin-processing peptidase 1 {ECO:0000313|EMBL:ABI55767.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
Displaying 12 items

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