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anamox1_curated_scaffold_1189

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1189_1
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3..521
DNA (519bp) protein (173aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000368937D
Uncharacterized protein {ECO:0000313|EMBL:AHM62709.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
anamox1_curated_scaffold_1189_2
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

523..1803
DNA (1281bp) protein (427aa)
hypothetical protein Tax=Pedobacter arcticus RepID=UPI0002D4CD8F
Uncharacterized protein {ECO:0000313|EMBL:AHM62708.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
anamox1_curated_scaffold_1189_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1809..2144
DNA (336bp) protein (112aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037285E6
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox1_curated_scaffold_1189_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2161..2580
DNA (420bp) protein (140aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037B729B
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:KIC89575.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
BadM/Rrf2 family transcriptional regulator
anamox1_curated_scaffold_1189_5
unknown

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comp(2592..3401)
DNA (810bp) protein (270aa)

This feature has no annotations

anamox1_curated_scaffold_1189_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3501..3752)
DNA (252bp) protein (84aa)
H+transporting two-sector ATPase delta/epsilon subunit Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSM4_CHIPD
H+transporting two-sector ATPase aubunit delta/epsilon
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox1_curated_scaffold_1189_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3784..5289)
DNA (1506bp) protein (502aa)
F0F1 ATP synthase subunit beta Tax=Segetibacter koreensis RepID=UPI00035D04FA
F0F1 ATP synthase subunit beta
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox1_curated_scaffold_1189_8
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5615..6955)
DNA (1341bp) protein (447aa)
glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XS85_PEDHD
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
anamox1_curated_scaffold_1189_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7330..8823)
DNA (1494bp) protein (498aa)
Polysaccharide biosynthesis protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL46_NIAKG
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AEW01887.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_1189_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8869..9972)
DNA (1104bp) protein (368aa)
Riboflavin biosynthesis protein RibD Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKY7_NIAKG
diaminohydroxyphosphoribosylaminopyrimidine deaminase
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_1189_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10163..11011
DNA (849bp) protein (283aa)
Protein-(Glutamine-N5) methyltransferase, release factor-specific Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKY8_NIAKG
protein-(glutamine-N5) methyltransferase
Protein-(Glutamine-N5) methyltransferase, release factor-specific {ECO:0000313|EMBL:AEW00827.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_1189_12

Not on your lists

comp(10995..11399)
DNA (405bp) protein (135aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035D0174
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:AIA18620.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
biopolymer transport protein ExbD/TolR
anamox1_curated_scaffold_1189_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11425..12099)
DNA (675bp) protein (225aa)
Outer membrane transport energization protein ExbB Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKZ1_NIAKG
Biopolymer transporter ExbB {ECO:0000313|EMBL:KIC93294.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
outer membrane transport energization protein ExbB
anamox1_curated_scaffold_1189_14
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12215..13465)
DNA (1251bp) protein (417aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035D72A3
peptidase T
anamox1_curated_scaffold_1189_15
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13698..15026
DNA (1329bp) protein (443aa)
Putative Zn-dependent peptidase Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KNZ0_SOLCM
putative Zn-dependent peptidase
Putative Zn-dependent peptidase {ECO:0000313|EMBL:AFD05512.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
anamox1_curated_scaffold_1189_16
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15060..17147
DNA (2088bp) protein (696aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00037415C8
putative Zn-dependent peptidase
Putative Zn-dependent peptidase {ECO:0000313|EMBL:AFD05511.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
anamox1_curated_scaffold_1189_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


17160..17993
DNA (834bp) protein (278aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Ribosomal RNA small subunit methyltransferase A Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP30_NIAKG
dimethyladenosine transferase
anamox1_curated_scaffold_1189_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18183..19745
DNA (1563bp) protein (521aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
lysyl-tRNA synthetase Tax=Segetibacter koreensis RepID=UPI00037D62D5
lysyl-tRNA synthetase
anamox1_curated_scaffold_1189_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19781..20206
DNA (426bp) protein (142aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI000371F82B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17808.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_1189_20
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20326..22965)
DNA (2640bp) protein (880aa)
TonB-dependent receptor Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T839_NIAKG
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAO44398.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
TonB-dependent receptor
anamox1_curated_scaffold_1189_trna_1
unknown

Not on your lists

23153..23226
DNA (74bp)
transferRNA His
anamox1_curated_scaffold_1189_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23318..24154)
DNA (837bp) protein (279aa)
Dihydropteroate synthase {ECO:0000313|EMBL:AEV98373.1}; EC=2.5.1.15 {ECO:0000313|EMBL:AEV98373.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Dihydropteroate synthase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEG3_NIAKG
dihydropteroate synthase
anamox1_curated_scaffold_1189_22
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24182..24727
DNA (546bp) protein (182aa)
Uncharacterized protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KUM6_HALH1
Uncharacterized protein {ECO:0000313|EMBL:KIC91898.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
anamox1_curated_scaffold_1189_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24748..25863
DNA (1116bp) protein (372aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI00036348D1
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:AEV98374.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_1189_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25867..26916
DNA (1050bp) protein (350aa)
ABC transporter permease Tax=Niabella aurantiaca RepID=UPI00035D4DBD
ABC transporter
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEV98375.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_1189_25
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27296..28117)
DNA (822bp) protein (274aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|SAAS:SAAS00078538};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
2-dehydro-3-deoxyphosphooctonate aldolase Tax=Niabella soli DSM 19437 RepID=H1NK26_9SPHI
2-dehydro-3-deoxyphosphogluconate aldolase
anamox1_curated_scaffold_1189_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28177..28737)
DNA (561bp) protein (187aa)
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:AEW01712.1}; EC=2.5.1.17 {ECO:0000313|EMBL:AEW01712.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003808377
ATP/cobalamin adenosyltransferase
anamox1_curated_scaffold_1189_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28757..29458)
DNA (702bp) protein (234aa)
Phosphonate-transporting ATPase {ECO:0000313|EMBL:AEW01711.1}; EC=3.6.3.28 {ECO:0000313|EMBL:AEW01711.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Phosphonate-transporting ATPase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THA1_NIAKG
phosphonate-transporting ATPase
anamox1_curated_scaffold_1189_28
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29463..29753)
DNA (291bp) protein (97aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
glutamyl-tRNA amidotransferase subunit C Tax=Niabella aurantiaca RepID=UPI0003690B4E
glutamyl-tRNA amidotransferase subunit C
anamox1_curated_scaffold_1189_29
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29900..30904
DNA (1005bp) protein (335aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000382E4B0
tryptophanyl-tRNA synthetase
Displaying items 1-30 of 32 in total

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