ggKbase home page

anamox1_curated_scaffold_1339

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1339_1
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..441)
DNA (441bp) protein (147aa)
Uncharacterized protein Tax=Pedobacter sp. BAL39 RepID=A6ECJ4_9SPHI
Contig53, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76857.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
anamox1_curated_scaffold_1339_2
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(552..3725)
DNA (3174bp) protein (1058aa)
Putative uncharacterized protein Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTR4_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU03700.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
anamox1_curated_scaffold_1339_3
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3982..5232)
DNA (1251bp) protein (417aa)
PepSY-associated TM helix domain protein Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IUS8_CYCMS
Putative iron-regulated transmembrane protein {ECO:0000313|EMBL:EOZ91853.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
PepSY-associated TM helix domain-containing protein
anamox1_curated_scaffold_1339_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5455..7029)
DNA (1575bp) protein (525aa)
Protein involved in gliding motility GldJ Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQG7_NIAKG
Gliding motility protein {ECO:0000313|EMBL:KIC95375.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
gliding motility protein GldJ
anamox1_curated_scaffold_1339_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8363..8497
DNA (135bp) protein (45aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003699011
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58681.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox1_curated_scaffold_1339_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8616..9755)
DNA (1140bp) protein (380aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000364B05B
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEV96783.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_1339_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9770..14149)
DNA (4380bp) protein (1460aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000363052E
CzcA family heavy metal efflux pump
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox1_curated_scaffold_1339_8
unknown

Not on your lists

14172..14294
DNA (123bp) protein (41aa)

This feature has no annotations

anamox1_curated_scaffold_1339_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14242..14619)
DNA (378bp) protein (126aa)
Uncharacterized protein Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KT09_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:KIC94159.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
anamox1_curated_scaffold_1339_10
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14803..15231)
DNA (429bp) protein (143aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000361D74F
Acetyltransferase {ECO:0000313|EMBL:KIC96154.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
N-acetyltransferase GCN5
anamox1_curated_scaffold_1339_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15376..15786
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRB9_CHIPD
6-pyruvoyl-tetrahydropterin synthase
Uncharacterized protein {ECO:0000313|EMBL:ACU64358.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox1_curated_scaffold_1339_12
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15790..16218
DNA (429bp) protein (143aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RZB4_LEAB4
6-pyruvoyl tetrahydrobiopterin synthase {ECO:0000313|EMBL:KIC89301.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
anamox1_curated_scaffold_1339_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16241..16846
DNA (606bp) protein (202aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
GTP cyclohydrolase Tax=Segetibacter koreensis RepID=UPI00036A16A7
GTP cyclohydrolase
anamox1_curated_scaffold_1339_14
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16850..17728
DNA (879bp) protein (293aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
Malonyl CoA-acyl carrier protein transacylase Tax=Algoriphagus machipongonensis RepID=A3HYI8_9BACT
ACP S-malonyltransferase
anamox1_curated_scaffold_1339_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18143..20251
DNA (2109bp) protein (703aa)
Prolyl oligopeptidase Tax=Niabella soli DSM 19437 RepID=H1NPN4_9SPHI
prolyl endopeptidase
Prolyl endopeptidase {ECO:0000313|EMBL:AHF14962.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_1339_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20797..22113)
DNA (1317bp) protein (439aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI000371961F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17135.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_1339_17
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(22200..22508)
DNA (309bp) protein (103aa)
Transcriptional regulator, AraC family Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCZ7_CHIPD
AraC family transcriptional regulator
Tax=BJP_IG2069_Bacteroidetes_43_11
anamox1_curated_scaffold_1339_18
unknown

Not on your lists

comp(22530..22997)
DNA (468bp) protein (156aa)

This feature has no annotations

anamox1_curated_scaffold_1339_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23444..24724)
DNA (1281bp) protein (427aa)
Aminopeptidase Tax=Algoriphagus machipongonensis RepID=A3HRM1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIC96126.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
peptidase M28
anamox1_curated_scaffold_1339_20
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24885..25472)
DNA (588bp) protein (196aa)
Acetyltransferase, N-acetylglutamate synthase Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G3H4_ECHVK
acetyltransferase, N-acetylglutamate synthase
Acetyltransferase, N-acetylglutamate synthase {ECO:0000313|EMBL:AGA80057.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
anamox1_curated_scaffold_1339_21
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25944..26387)
DNA (444bp) protein (148aa)
Small heat shock protein Tax=Fulvivirga imtechensis AK7 RepID=L8JZW0_9BACT
Spore protein SP21 {ECO:0000313|EMBL:CEJ72060.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
heat shock protein Hsp20
anamox1_curated_scaffold_1339_22
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26589..27944)
DNA (1356bp) protein (452aa)
MiaB-like tRNA modifying enzyme Tax=Niabella soli DSM 19437 RepID=H1NJ88_9SPHI
2-methylthioadenine synthetase {ECO:0000313|EMBL:KIC92726.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
2-methylthioadenine synthetase
anamox1_curated_scaffold_1339_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27980..28366
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBW7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99260.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_1339_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28423..29202
DNA (780bp) protein (260aa)
GH3 auxin-responsive promoter Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T919_NIAKG
GH3 auxin-responsive promoter
GH3 auxin-responsive promoter {ECO:0000313|EMBL:AEV96972.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_1339_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29262..29915
DNA (654bp) protein (218aa)
gh3 auxin-responsive promoter Tax=Segetibacter koreensis RepID=UPI00035D770A
GH3 auxin-responsive promoter
GH3 auxin-responsive promoter {ECO:0000313|EMBL:AEV96972.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_1339_26
Hydrogenobacter thermophilus, Hydrogenobacter, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(30006..31994)
DNA (1989bp) protein (663aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DFM1_HYDTT
4Fe-4S ferredoxin
Cytochrome b/b6 {ECO:0000313|EMBL:BAI68623.1}; species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenobacter.;" source="Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6).;"
anamox1_curated_scaffold_1339_27
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(31963..32736)
DNA (774bp) protein (258aa)
Electron transport protein SCO1/SenC Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DFL6_HYDTT
SCO1/SenC/PrrC family protein {ECO:0000313|EMBL:KJU81996.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavaricum.;"
electron transport protein SCO1/SenC
anamox1_curated_scaffold_1339_28
Hydrogenobacter thermophilus, Hydrogenobacter, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(32779..33150)
DNA (372bp) protein (124aa)
Cytochrome c oxidase subunit I Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DFL8_HYDTT
cytochrome c oxidase subunit I
Heme/copper-type cytochrome/quinol oxidase subunit 1 {ECO:0000313|EMBL:BAI68620.1}; species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenobacter.;" source="Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6).;"
anamox1_curated_scaffold_1339_29
Hydrogenobacter thermophilus, Hydrogenobacter, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(34590..35513)
DNA (924bp) protein (308aa)
Cytochrome c oxidase subunit II Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DFL9_HYDTT
cytochrome c oxidase subunit II
Heme/copper-type cytochrome/quinol oxidase subunit 2 {ECO:0000313|EMBL:BAI68621.1}; species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenobacter.;" source="Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6).;"
anamox1_curated_scaffold_1339_30
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(35541..35726)
DNA (186bp) protein (62aa)
Uncharacterized protein Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UXB7_9AQUI
Uncharacterized protein {ECO:0000313|EMBL:EDP74738.1}; species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenivirga.;" source="Hydrogenivirga sp. 128-5-R1-1.;"
hypothetical protein
Displaying items 1-30 of 41 in total

View Taxonomy