ggKbase home page

anamox1_curated_scaffold_2278

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2278_1
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3..674)
DNA (672bp) protein (224aa)
talA; transaldolase (EC:5.3.1.9)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
Transaldolase Tax=Fibrella aestuarina BUZ 2 RepID=I0K2K5_9BACT
anamox1_curated_scaffold_2278_2
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(702..1049)
DNA (348bp) protein (116aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
Alkylhydroperoxidase AhpD family core domain protein Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YRN8_AEQSU
alkylhydroperoxidase
anamox1_curated_scaffold_2278_3
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1075..3858)
DNA (2784bp) protein (928aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
aconitase (EC:4.2.1.3)
aconitate hydratase Tax=Flavobacterium rivuli RepID=UPI000381A710
anamox1_curated_scaffold_2278_4
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3895..4614)
DNA (720bp) protein (240aa)
Oxidoreductase FAD/NAD(P)-binding domain protein Tax=Niabella soli DSM 19437 RepID=H1NM24_9SPHI
Ferredoxin reductase {ECO:0000313|EMBL:CDP52160.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
flavodoxin reductase
anamox1_curated_scaffold_2278_5
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4624..5091)
DNA (468bp) protein (156aa)
Probable universal stress protein bin=GWF2_Bacteroidetes_49_14 species=Flavobacterium psychrophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
uspA; universal stress protein family protein
Tax=GWF2_Bacteroidetes_49_14_curated
anamox1_curated_scaffold_2278_6
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(5186..7186)
DNA (2001bp) protein (667aa)
Strongly similar to transketolase 1 thiamin-binding isozyme {ECO:0000313|EMBL:CAJ73432.1}; EC=2.2.1.1 {ECO:0000313|EMBL:CAJ73432.1};; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
cbbT; transketolase (TK) (EC:2.2.1.1)
Strongly similar to transketolase 1 thiamin-binding isozyme Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q778_9BACT
anamox1_curated_scaffold_2278_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7412..8734)
DNA (1323bp) protein (441aa)
Alpha-L-fucosidase Tax=Niabella soli DSM 19437 RepID=H1NM80_9SPHI
Alpha-L-fucosidase {ECO:0000313|EMBL:KIC94037.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
alpha-L-fucosidase
anamox1_curated_scaffold_2278_8
unknown

Not on your lists

comp(8779..8991)
DNA (213bp) protein (71aa)

This feature has no annotations

anamox1_curated_scaffold_2278_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9256..11133
DNA (1878bp) protein (626aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000368438D
chloride channel protein
Chloride channel protein {ECO:0000313|EMBL:AHF16327.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_2278_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11212..11643)
DNA (432bp) protein (144aa)
Transcriptional regulator, BadM/Rrf2 family Tax=Myroides RepID=H1ZDH9_MYROD
Uncharacterized protein {ECO:0000313|EMBL:KIC89354.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
BadM/Rrf2 family transcriptional regulator
anamox1_curated_scaffold_2278_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11675..12349)
DNA (675bp) protein (225aa)
Uncharacterized protein Tax=Niabella soli DSM 19437 RepID=H1NUK6_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17878.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_2278_12
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12361..13662)
DNA (1302bp) protein (434aa)
RNA polymerase sigma54 factor Tax=Segetibacter koreensis RepID=UPI0003668B1E
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:GAO42804.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
RNA polymerase sigma54 factor
Displaying 12 items

View Taxonomy