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anamox1_curated_scaffold_2637

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2637_1
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3..788)
DNA (786bp) protein (262aa)
PDK repeat-containing protein Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FW95_ECHVK
PDK repeat-containing protein
PDK repeat-containing protein {ECO:0000313|EMBL:AGA78174.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
anamox1_curated_scaffold_2637_2
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1034..1678
DNA (645bp) protein (215aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000372B69E
Uncharacterized protein {ECO:0000313|EMBL:KIC89560.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
anamox1_curated_scaffold_2637_3
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1800..2600)
DNA (801bp) protein (267aa)
Uncharacterized protein Tax=Flavobacterium enshiense DK69 RepID=V6SBB5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF14522.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
uncharacterized protein
anamox1_curated_scaffold_2637_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2628..3902)
DNA (1275bp) protein (425aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQG6_NIAKG
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
anamox1_curated_scaffold_2637_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3916..6279)
DNA (2364bp) protein (788aa)
Peptidase S9 prolyl oligopeptidase active site domain protein Tax=Niabella soli DSM 19437 RepID=H1NQA9_9SPHI
peptidase S9
Peptidase S9 {ECO:0000313|EMBL:AHF15881.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_2637_6
Chlorobium chlorochromatii, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(6547..6855)
DNA (309bp) protein (103aa)
Transcriptional regulator, XRE family Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3AQT1_CHLCH
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABB28644.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium chlorochromatii (strain CaD3).;"
anamox1_curated_scaffold_2637_7
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(6836..6997)
DNA (162bp) protein (54aa)
hypothetical protein Tax=Pedobacter arcticus RepID=UPI000373EE6A
protein of unknown function DUF891
Tax=GWF2_Bacteroidetes_38_335_curated
anamox1_curated_scaffold_2637_8
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7068..7784)
DNA (717bp) protein (239aa)
transposase Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=UPI000217E28F
Putative transposase OrfB {ECO:0000313|EMBL:KHJ36793.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein
anamox1_curated_scaffold_2637_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7928..8194)
DNA (267bp) protein (89aa)
Transposase IS3/IS911 family protein Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RXF9_LEAB4
Transposase {ECO:0000313|EMBL:KIC89136.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
transposase is3/is911 family protein
anamox1_curated_scaffold_2637_10
unknown

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8221..8412
DNA (192bp) protein (64aa)

This feature has no annotations

anamox1_curated_scaffold_2637_11

Not on your lists

comp(8407..9657)
DNA (1251bp) protein (417aa)
hypothetical protein bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
Uncharacterized protein {ECO:0000313|EMBL:EKD82081.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
anamox1_curated_scaffold_2637_12
unknown

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comp(9665..10198)
DNA (534bp) protein (178aa)

This feature has no annotations

anamox1_curated_scaffold_2637_13
unknown

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comp(10212..10514)
DNA (303bp) protein (101aa)

This feature has no annotations

anamox1_curated_scaffold_2637_14
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10544..11764)
DNA (1221bp) protein (407aa)
Uncharacterized protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZC9_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE48424.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
anamox1_curated_scaffold_2637_15
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12080..12394
DNA (315bp) protein (105aa)
Transposase IS4 family protein Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6U9_PEDSD
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ADY52209.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
Displaying 15 items

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