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anamox1_curated_scaffold_659

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_659_1
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1..252)
DNA (252bp) protein (84aa)
Uncharacterized protein Tax=Pontibacter sp. BAB1700 RepID=J0LP06_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EJF11203.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
anamox1_curated_scaffold_659_2
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(272..3424)
DNA (3153bp) protein (1051aa)
Uncharacterized protein Tax=Sphingobacterium paucimobilis HER1398 RepID=U2JET0_9SPHI
TonB-dependent receptor plug {ECO:0000313|EMBL:KGE14110.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
hypothetical protein
anamox1_curated_scaffold_659_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3689..5461)
DNA (1773bp) protein (591aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00035C5FCA
DNA polymerase III subunit gamma/tau {ECO:0000313|EMBL:KIC92809.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
DNA polymerase III subunit gamma/tau
anamox1_curated_scaffold_659_4
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5737..5982)
DNA (246bp) protein (82aa)
50S ribosomal protein L7 Tax=Niabella aurantiaca RepID=UPI000379EB9C
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
50S ribosomal protein L7
anamox1_curated_scaffold_659_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(6091..6666)
DNA (576bp) protein (192aa)
50S ribosomal protein L10 Tax=Niabella aurantiaca RepID=UPI0003612CAB
50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|RuleBase:RU003636, ECO:0000256|SAAS:SAAS00104918}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_659_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(6711..7400)
DNA (690bp) protein (230aa)
50S ribosomal protein L1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG3_CHIPD
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
rplA; 50S ribosomal protein L1
anamox1_curated_scaffold_659_7
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(7437..7880)
DNA (444bp) protein (148aa)
50S ribosomal protein L11 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7E3_NIAKG
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
50S ribosomal protein L11
anamox1_curated_scaffold_659_8
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8866..10749
DNA (1884bp) protein (628aa)
GGDEF domain protein Tax=Mariniradius saccharolyticus AK6 RepID=M7X804_9BACT
GGDEF domain protein {ECO:0000313|EMBL:EMS33530.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
putative signal transduction histidine kinase
anamox1_curated_scaffold_659_9
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

10801..11445
DNA (645bp) protein (215aa)
Putative transcriptional regulatory protein NarL Tax=Cesiribacter andamanensis AMV16 RepID=M7NLZ4_9BACT
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIF34118.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
Transcriptional regulatory protein liaR
anamox1_curated_scaffold_659_10
unknown

Not on your lists

11540..12619
DNA (1080bp) protein (360aa)

This feature has no annotations

anamox1_curated_scaffold_659_11
unknown

Not on your lists

13125..14219
DNA (1095bp) protein (365aa)

This feature has no annotations

anamox1_curated_scaffold_659_12
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14527..15294)
DNA (768bp) protein (256aa)
Nitrous-oxide metabolic protein NosY Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1A2_DYAFD
nitrous-oxide metabolic protein NosY
Nitrous-oxide metabolic protein NosY {ECO:0000313|EMBL:ACT91959.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
anamox1_curated_scaffold_659_13
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15291..16034)
DNA (744bp) protein (248aa)
ABC transporter Tax=Flavobacterium sp. F52 RepID=J1AAW8_9FLAO
Copper ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGO96400.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
ABC transporter
anamox1_curated_scaffold_659_14
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16031..17278)
DNA (1248bp) protein (416aa)
Copper-binding protein Tax=Flavobacterium limnosediminis JC2902 RepID=V6SR92_9FLAO
Copper-binding protein {ECO:0000313|EMBL:ESU29218.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
parallel beta-helix repeat-containing protein
anamox1_curated_scaffold_659_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17278..17709)
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDS2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01522.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_659_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17712..18302)
DNA (591bp) protein (197aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDS2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01522.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_659_17
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18365..20362)
DNA (1998bp) protein (666aa)
nitrous-oxide reductase Tax=Segetibacter koreensis RepID=UPI00036A0A00
Nitrous oxide reductase {ECO:0000313|EMBL:KIC89491.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
nitrous oxide reductase apoprotein
anamox1_curated_scaffold_659_18
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20520..20987)
DNA (468bp) protein (156aa)
Cytochrome c class I Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDS4_NIAKG
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:ACT91954.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
anamox1_curated_scaffold_659_19
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21209..22468
DNA (1260bp) protein (420aa)
Uncharacterized protein Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GPC3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR93395.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein
anamox1_curated_scaffold_659_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22552..23388
DNA (837bp) protein (279aa)
UspA domain-containing protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJU0_NIAKG
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AEW01838.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox1_curated_scaffold_659_21
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23421..23882
DNA (462bp) protein (154aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037D0703
Uncharacterized protein {ECO:0000313|EMBL:GAO40998.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
anamox1_curated_scaffold_659_22
unknown

Not on your lists

23985..24347
DNA (363bp) protein (121aa)

This feature has no annotations

anamox1_curated_scaffold_659_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24340..25383)
DNA (1044bp) protein (348aa)
Transcriptional regulator, Crp/Fnr family Tax=Niabella soli DSM 19437 RepID=H1NNE3_9SPHI
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHF15300.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_659_24
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25380..26621)
DNA (1242bp) protein (414aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
PAS/PAC sensor signal transduction histidine kinase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAL8_CHIPD
PAS/PAC sensor signal transduction histidine kinase
anamox1_curated_scaffold_659_25
unknown

Not on your lists

comp(27274..28653)
DNA (1380bp) protein (460aa)

This feature has no annotations

anamox1_curated_scaffold_659_26
unknown

Not on your lists

comp(28834..29508)
DNA (675bp) protein (225aa)

This feature has no annotations

anamox1_curated_scaffold_659_27
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29632..30687)
DNA (1056bp) protein (352aa)
Contig82, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75795.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
anamox1_curated_scaffold_659_28
unknown

Not on your lists

comp(30700..31536)
DNA (837bp) protein (279aa)

This feature has no annotations

anamox1_curated_scaffold_659_29
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(33016..34656)
DNA (1641bp) protein (547aa)
Uncharacterized protein Tax=Fibrisoma limi BUZ 3 RepID=I2GM88_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH55015.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
anamox1_curated_scaffold_659_30
unknown

Not on your lists

comp(34661..34942)
DNA (282bp) protein (94aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

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