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LC_0.1_scaffold_1004

Search features with annotation key words

Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LC_0.1_scaffold_1004_1
unknown

Not on your lists

comp(3..410)
DNA (408bp) protein (136aa)

This feature has no annotations

LC_0.1_scaffold_1004_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(407..637)
DNA (231bp) protein (77aa)
Transcriptional regulator, ArsR family n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RF80_METP4
Uncharacterized protein {ECO:0000313|EMBL:KCZ72894.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ArsR family transcriptional regulator
LC_0.1_scaffold_1004_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(669..1769)
DNA (1101bp) protein (367aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72893.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_1004_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2202..2648
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q467S5_METBF
Uncharacterized protein {ECO:0000313|EMBL:KCZ72694.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_1004_5
unknown

Not on your lists

2645..3277
DNA (633bp) protein (211aa)

This feature has no annotations

LC_0.1_scaffold_1004_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

3274..3819
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPV6_METAC
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_1004_7
unknown

Not on your lists

3816..5621
DNA (1806bp) protein (602aa)

This feature has no annotations

LC_0.1_scaffold_1004_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5632..6813)
DNA (1182bp) protein (394aa)
Molybdopterin biosynthesis enzyme {ECO:0000313|EMBL:KCZ70489.1}; EC=2.10.1.1 {ECO:0000313|EMBL:KCZ70489.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Molybdenum cofactor biosynthesis protein MoeA2 n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TIQ5_METAC
molybdenum cofactor biosynthesis protein MoeA2
LC_0.1_scaffold_1004_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6810..7082)
DNA (273bp) protein (91aa)
Ubiquitin-like small archaeal modifier protein (SAMP) n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7T2_METMS
MoaD family protein {ECO:0000313|EMBL:KCZ70488.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ubiquitin-like small archaeal modifier protein (SAMP)
LC_0.1_scaffold_1004_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

7144..8940
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TIQ7_METAC
glycosyl transferase family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_1004_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8925..9218)
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XTB5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KCZ70591.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_1004_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9438..9602
DNA (165bp) protein (55aa)
Putative small metal-binding protein {ECO:0000313|EMBL:KCZ70592.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_1004_trna_1
unknown

Not on your lists

comp(9650..9724)
DNA (75bp)
transferRNA Pro
LC_0.1_scaffold_1004_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(9783..10025)
DNA (243bp) protein (81aa)
Hypothetical membrane protein n=1 Tax=uncultured archaeon RepID=D1J984_9ARCH
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_1004_14
unknown

Not on your lists

comp(10534..10926)
DNA (393bp) protein (131aa)

This feature has no annotations

LC_0.1_scaffold_1004_15
unknown

Not on your lists

comp(10974..11123)
DNA (150bp) protein (50aa)

This feature has no annotations

LC_0.1_scaffold_1004_16
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

11387..11758
DNA (372bp) protein (124aa)
Glyoxalase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPA3_METAC
glyoxalase
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_1004_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

11909..12145
DNA (237bp) protein (79aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_1004_18
GWC1_OD1_39_29_partial, Parcubacteria, Bacteria

Not on your lists

comp(12324..13037)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AVA0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR15147.1}; TaxID=1618900 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_29.;"
hypothetical protein
LC_0.1_scaffold_1004_19
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(13122..13577)
DNA (456bp) protein (152aa)
cbdbA1472; flavodoxin id=1241686 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
flavodoxin/nitric oxide synthase
Tax=CG_Dehalo_01
LC_0.1_scaffold_1004_20
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(13872..14372)
DNA (501bp) protein (167aa)
PKD domain containing protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I5Z5_METB6
PKD domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_1004_21
unknown

Not on your lists

comp(14365..14460)
DNA (96bp) protein (32aa)

This feature has no annotations

LC_0.1_scaffold_1004_22
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

15086..15304
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos37D1 RepID=Q648L3_9ARCH
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_1004_23
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

15297..15572
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI000379219A
RelE/StbE family addiction module toxin
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_1004_24
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(15811..16419)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RD93_METP4
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_1004_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16530..18821)
DNA (2292bp) protein (764aa)
UPI0003D1A8D6 related cluster n=1 Tax=unknown RepID=UPI0003D1A8D6
ERCC4-like helicase {ECO:0000313|EMBL:KCZ73264.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Hef nuclease
LC_0.1_scaffold_1004_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18981..19142
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2R1U6_METFO
Uncharacterized protein {ECO:0000313|EMBL:KCZ71906.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_1004_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19149..19610
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos28G7 RepID=Q64AX2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KCZ71907.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_1004_28
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

19607..20773
DNA (1167bp) protein (389aa)
Geranylgeranyl diphosphate reductase (EC:1.3.1.83)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PRY9_METMA
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_1004_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20837..21625
DNA (789bp) protein (263aa)
Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000313|EMBL:KCZ71180.1}; EC=6.3.5.3 {ECO:0000313|EMBL:KCZ71180.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LPP2_SYNAS
Displaying items 1-30 of 34 in total

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