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LC_0.1_scaffold_2381

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LC_0.1_scaffold_2381_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2..154)
DNA (153bp) protein (51aa)
N-acetylglutamate kinase {ECO:0000313|EMBL:KCZ72891.1}; EC=2.7.2.8 {ECO:0000313|EMBL:KCZ72891.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MBL5_9EURY
LC_0.1_scaffold_2381_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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395..568
DNA (174bp) protein (58aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_2381_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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561..998
DNA (438bp) protein (146aa)
Predicted nucleic acid-binding protein, containing PIN domain n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JG21_THEKO
nucleic acid-binding protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_2381_4
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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1102..1764
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T7P4_METSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ09612.1}; TaxID=877455 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium lacus (strain AL-21).;"
LC_0.1_scaffold_2381_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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1837..2136
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W7R5_UNCMA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_2381_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2406..3467)
DNA (1062bp) protein (354aa)
Isocitrate/isopropylmalate dehydrogenase {ECO:0000313|EMBL:KCZ73699.1}; EC=1.1.1.42 {ECO:0000313|EMBL:KCZ73699.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
icd; isocitrate dehydrogenase (EC:1.1.1.42)
Isocitrate dehydrogenase (NADP) n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAL0_METCZ
LC_0.1_scaffold_2381_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3451..4179)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E600_METEZ
Uncharacterized protein {ECO:0000313|EMBL:KCZ70412.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_2381_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4198..5469)
DNA (1272bp) protein (424aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Probable 3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XL14_METZD
3-phosphoshikimate 1-carboxyvinyltransferase
LC_0.1_scaffold_2381_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5569..6876
DNA (1308bp) protein (436aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
pyridoxal-phosphate dependent TrpB-like protein (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNF8_METZD
LC_0.1_scaffold_2381_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6873..8126
DNA (1254bp) protein (418aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1PU45_METMZ
Uncharacterized protein {ECO:0000313|EMBL:KCZ71181.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_2381_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8182..8904)
DNA (723bp) protein (241aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72901.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_2381_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8898..9503)
DNA (606bp) protein (202aa)
PDK repeat-containing protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L1C6_METHD
Uncharacterized protein {ECO:0000313|EMBL:KCZ70793.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_2381_13
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9568..10998)
DNA (1431bp) protein (477aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J931_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB44255.1}; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
LC_0.1_scaffold_2381_14
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(11012..13015)
DNA (2004bp) protein (668aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VWN2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ENO12324.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
hypothetical protein
LC_0.1_scaffold_2381_15
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13053..14519)
DNA (1467bp) protein (489aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J931_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB44256.1}; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
LC_0.1_scaffold_2381_16
unknown

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comp(14537..15022)
DNA (486bp) protein (162aa)

This feature has no annotations

Displaying 16 items

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