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LC_0.1_scaffold_2729

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LC_0.1_scaffold_2729_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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1..147
DNA (147bp) protein (49aa)
Serine--glyoxylate aminotransferase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1P5N7_METMZ
Serine--glyoxylate aminotransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_2729_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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163..996
DNA (834bp) protein (278aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KTV2_METHD
dihydrodipicolinate reductase
LC_0.1_scaffold_2729_3
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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1033..1839
DNA (807bp) protein (269aa)
Methyltransferase type 11 n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GH63_METPE
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACL16468.1}; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c).;"
LC_0.1_scaffold_2729_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1962..3530
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RZZ9_FERPA
Uncharacterized protein {ECO:0000313|EMBL:KCZ72456.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_2729_5
unknown

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comp(3951..4352)
DNA (402bp) protein (134aa)

This feature has no annotations

LC_0.1_scaffold_2729_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4628..5389
DNA (762bp) protein (254aa)
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase HgdC id=3942986 bin=GWC2_Proteo_65_14_Ab886 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
CoA-substrate-specific enzyme activase
Tax=RBG_16_Deltaproteobacteria_64_85_curated
LC_0.1_scaffold_2729_7
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5401..6780
DNA (1380bp) protein (460aa)
2-hydroxyglutaryl-CoA dehydratase D-component n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYM7_THEOJ
3-hydroxyacyl-ACP dehydratase {ECO:0000313|EMBL:KGG79503.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
2-hydroxyglutaryl-CoA dehydratase subunit D
LC_0.1_scaffold_2729_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(6793..7527)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XE72_9CHRO
protein of unknown function DUF81
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_2729_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7539..8240)
DNA (702bp) protein (234aa)
Glutamine amidotransferase (Class I) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W1E4_UNCMA
GMP synthase family protein {ECO:0000313|EMBL:KCZ73688.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
glutamine amidotransferase (class I)
LC_0.1_scaffold_2729_10
Petrotoga mobilis, Petrotoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(8285..9322)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BI25_PETMO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX32316.1}; TaxID=403833 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Petrotoga.;" source="Petrotoga mobilis (strain DSM 10674 / SJ95).;"
LC_0.1_scaffold_2729_11
unknown

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comp(9373..9531)
DNA (159bp) protein (53aa)

This feature has no annotations

LC_0.1_scaffold_2729_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9564..9944)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BCB2_9EURY
Putative signal-transduction protein {ECO:0000313|EMBL:KCZ73690.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_2729_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10104..10373)
DNA (270bp) protein (90aa)
Ferredoxin III, nif-specific n=1 Tax=Fischerella sp. JSC-11 RepID=G6FPB0_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KCZ73691.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ferredoxin III
LC_0.1_scaffold_2729_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10383..11699)
DNA (1317bp) protein (439aa)
Nitrogenase molybdenum-iron protein {ECO:0000313|EMBL:KCZ73692.1}; EC=1.18.6.1 {ECO:0000313|EMBL:KCZ73692.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nitrogenase (EC:1.18.6.1)
Nitrogenase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D760_METSW
LC_0.1_scaffold_2729_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11700..13070)
DNA (1371bp) protein (457aa)
Nitrogenase protein alpha chain {ECO:0000256|RuleBase:RU004022}; EC=1.18.6.1 {ECO:0000256|RuleBase:RU004022};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Nitrogenase protein alpha chain n=1 Tax=uncultured archaeon RepID=A9ZRT0_9ARCH
nitrogenase component I subunit alpha
LC_0.1_scaffold_2729_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13345..13731)
DNA (387bp) protein (129aa)
GlnB-like protein 2 n=1 Tax=Heliobacterium gestii RepID=I7FZB5_HELGE
Nitrogen regulatory protein PII {ECO:0000313|EMBL:KCZ73694.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nitrogen regulatory protein P-II
LC_0.1_scaffold_2729_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13728..13844)
DNA (117bp) protein (39aa)
Nitrogen fixation nifHD2 region glnB-like protein 1 (Nitrogen regulatory protein P-II ) n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BXC4_METCG
Nitrogen regulatory protein PII {ECO:0000313|EMBL:KCZ73695.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
glnBA; nitrogen regulatory protein P-II
Displaying 17 items

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