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LC_0.1_scaffold_5156

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LC_0.1_scaffold_5156_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(10..282)
DNA (273bp) protein (91aa)
Response regulator n=1 Tax=Lyngbya aestuarii BL J RepID=U7QN41_9CYAN
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:KCZ71462.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
response regulator receiver protein
LC_0.1_scaffold_5156_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(279..2591)
DNA (2313bp) protein (771aa)
PAS fold family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VWF9_9CYAN
PAS domain S-box {ECO:0000313|EMBL:KCZ71447.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
sensory transduction histidine kinase
LC_0.1_scaffold_5156_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2662..4665)
DNA (2004bp) protein (668aa)
Sensory box protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QKH5_9CYAN
PAS domain S-box {ECO:0000313|EMBL:KCZ71453.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
multi-sensor signal transduction histidine kinase
LC_0.1_scaffold_5156_4
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4843..6810
DNA (1968bp) protein (656aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TW8_METBU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE53108.1}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 /; ACE-M).;"
LC_0.1_scaffold_5156_5
unknown

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6807..7016
DNA (210bp) protein (70aa)

This feature has no annotations

LC_0.1_scaffold_5156_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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7348..9159
DNA (1812bp) protein (604aa)
Probable potassium transport system protein kup id=2248182 bin=GWB2_Nitrospirae_rel_47_37 species=uncultured Nitrospirae bacterium MY3-5B genus=unknown taxon_order=unknown taxon_class=unknown phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
kup; potassium uptake protein Kup
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 6 items

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