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LC_0.1_scaffold_3128

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LC_0.1_scaffold_3128_1
unknown

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1..903
DNA (903bp) protein (301aa)

This feature has no annotations

LC_0.1_scaffold_3128_2
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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964..2535
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TQK5_METAC
Uncharacterized protein {ECO:0000313|EMBL:AKB36892.1}; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae C2J.;"
hypothetical protein
LC_0.1_scaffold_3128_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2538..3560
DNA (1023bp) protein (341aa)
ABC transporter, ATPase subunit n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12V06_METBU
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:KCZ71312.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ABC transporter, ATPase subunit
LC_0.1_scaffold_3128_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3580..4497
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TQJ6_METAC
ABC-type transport system involved in multi-copper enzyme maturation, permease component {ECO:0000313|EMBL:KCZ71023.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_3128_5
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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4532..5689
DNA (1158bp) protein (386aa)
Subtilisin-like serine protease n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TE35_9CLOT
Peptidase S8/S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AKG34983.1}; TaxID=1333534 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus ATCC 35681.;"
peptidase S8/S53 subtilisin kexin sedolisin
LC_0.1_scaffold_3128_6
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

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5820..6350
DNA (531bp) protein (177aa)
Tax=RBG_16_OP11_Levybacteria_35_11_curated
LC_0.1_scaffold_3128_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6500..7906)
DNA (1407bp) protein (469aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71078.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
4Fe-4S ferredoxin iron-sulfur binding domain protein id=2053776 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
LC_0.1_scaffold_3128_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7887..9305)
DNA (1419bp) protein (473aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70750.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Pentaxin (Fragment) id=4560606 bin=GWF2_Ignavibacteria_35_20 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
LC_0.1_scaffold_3128_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9332..9568)
DNA (237bp) protein (79aa)
SirA family protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAN3_METMS
Putative redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:KCZ72815.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SirA family protein
LC_0.1_scaffold_3128_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(9723..10325)
DNA (603bp) protein (201aa)
Lrp/AsnC family transcription regulator n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0I291_9EURY
lrp; Lrp/AsnC family transcription regulator
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_3128_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10458..10688)
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72182.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_3128_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10701..11396)
DNA (696bp) protein (232aa)
Cytochrome c assembly protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAG4_METMS
ABC-type transport system involved in cytochrome c biogenesis, permease component {ECO:0000313|EMBL:KCZ70410.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
LC_0.1_scaffold_3128_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11557..11913
DNA (357bp) protein (119aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71439.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_3128_14
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

11903..12568
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SIM3_THEM7
hypothetical protein
Tax=RBG_16_Chloroflexi_50_9_curated
Displaying 14 items

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