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LC_0.1_scaffold_110

Search features with annotation key words

Displaying items 1-30 of 61 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LC_0.1_scaffold_110_1
Sulfolobus islandicus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(72..299)
DNA (228bp) protein (76aa)
ATPase-like protein n=1 Tax=Sulfolobus islandicus (strain HVE10/4) RepID=F0NNC9_SULIH
ATPase-like protein
ATPase-like protein {ECO:0000313|EMBL:ADX81887.1}; TaxID=930943 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus islandicus (strain HVE10/4).;"
LC_0.1_scaffold_110_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

770..1555
DNA (786bp) protein (262aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
5-nucleotidase SurE (EC:3.1.3.5)
5'-nucleotidase SurE n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=SURE_METBF
LC_0.1_scaffold_110_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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1666..2127
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W1J1_UNCMA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_110_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

2141..2287
DNA (147bp) protein (49aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_110_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

2284..2496
DNA (213bp) protein (71aa)
ThiamineS protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KPW8_ARCVS
sulfur carrier protein ThiS
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_110_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2870..3874)
DNA (1005bp) protein (335aa)
TrkA-N domain protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRE7_HALUD
Exopolyphosphatase-like enzyme {ECO:0000313|EMBL:KCZ73150.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
TrkA-N domain protein
LC_0.1_scaffold_110_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3959..5005)
DNA (1047bp) protein (349aa)
DNA primase large subunit PriL n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KUD3_METHD
DNA primase large subunit PriL {ECO:0000256|HAMAP-Rule:MF_00701}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DNA primase, large subunit
LC_0.1_scaffold_110_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5010..5747)
DNA (738bp) protein (246aa)
DNA polymerase sliding clamp n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9H9_METCZ
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
pcn; DNA polymerase sliding clamp
LC_0.1_scaffold_110_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5847..6335
DNA (489bp) protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72095.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_110_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6359..6580)
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71796.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_110_11
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6981..7538)
DNA (558bp) protein (186aa)
Snf7 family protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XN25_METZD
Uncharacterized protein {ECO:0000313|EMBL:KGK98827.1}; TaxID=2226 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens.;"
Snf7 family protein
LC_0.1_scaffold_110_12
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7538..7729)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XN26_METZD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH61138.1}; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source="Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5); (Methanohalophilus zhilinae).;"
LC_0.1_scaffold_110_13
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7797..9215
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XN27_METZD
Uncharacterized protein {ECO:0000313|EMBL:AKB84845.1}; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens MM1.;"
hypothetical protein
LC_0.1_scaffold_110_14
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9265..11154
DNA (1890bp) protein (630aa)
Uncharacterized protein n=1 Tax=Lactobacillus casei subsp. casei ATCC 393 RepID=S6BUB2_LACCA
Uncharacterized protein {ECO:0000313|EMBL:KGK98829.1}; TaxID=2226 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens.;"
LC_0.1_scaffold_110_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11200..11607
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KRV4_ARCVS
Uncharacterized protein {ECO:0000313|EMBL:KCZ71808.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_110_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11604..12023
DNA (420bp) protein (140aa)
DNA polymerase beta domain protein region n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KRV5_ARCVS
Nucleotidyltransferase family protein {ECO:0000313|EMBL:KCZ71809.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DNA polymerase beta domain-containing protein
LC_0.1_scaffold_110_17
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12066..13373
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XN24_METZD
Uncharacterized protein {ECO:0000313|EMBL:KGK98826.1}; TaxID=2226 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens.;"
hypothetical protein
LC_0.1_scaffold_110_18
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13422..15575
DNA (2154bp) protein (718aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XN28_METZD
Serine/threonine kinase {ECO:0000313|EMBL:AKB25032.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. MTP4.;"
glycine betaine ABC transporter substrate-binding protein
LC_0.1_scaffold_110_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15591..15761
DNA (171bp) protein (57aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73108.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_110_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15748..16308
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B79AC1
Conserved Archaeal protein (DUF2204) {ECO:0000313|EMBL:KCZ73107.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_110_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16453..17793
DNA (1341bp) protein (447aa)
Putative uncharacterized protein n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BCZ2_METIK
Uncharacterized protein {ECO:0000313|EMBL:KCZ72366.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_110_22
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17799..18338
DNA (540bp) protein (180aa)
Conserved domain protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67M28_SYMTH
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:BAD41267.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
LC_0.1_scaffold_110_23
unknown

Not on your lists

18355..19116
DNA (762bp) protein (254aa)

This feature has no annotations

LC_0.1_scaffold_110_24
unknown

Not on your lists

19123..19212
DNA (90bp) protein (30aa)

This feature has no annotations

LC_0.1_scaffold_110_25
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19217..20899
DNA (1683bp) protein (561aa)
Cell division protein FtsH {ECO:0000313|EMBL:AKB84843.1}; EC=3.4.24.- {ECO:0000313|EMBL:AKB84843.1};; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens MM1.;"
Microtubule-severing ATPase (EC:3.6.4.3)
Microtubule-severing ATPase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XLU8_METZD
LC_0.1_scaffold_110_26
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20926..23508
DNA (2583bp) protein (861aa)
Putative uncharacterized protein C1_0013 n=1 Tax=uncultured archaeon RepID=Q2VP74_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AKB25921.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. MTP4.;"
serine/threonine kinase
LC_0.1_scaffold_110_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23529..24026)
DNA (498bp) protein (166aa)
4-hydroxybenzoate synthetase (Chorismate lyase) {ECO:0000313|EMBL:KCZ73394.1}; EC=4.1.3.40 {ECO:0000313|EMBL:KCZ73394.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46G79_METBF
hypothetical protein
LC_0.1_scaffold_110_28
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(24029..24256)
DNA (228bp) protein (76aa)
UPI0003D1ABF4 related cluster n=1 Tax=unknown RepID=UPI0003D1ABF4
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_110_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24718..25689)
DNA (972bp) protein (324aa)
Putative uncharacterized protein C3_0014 n=1 Tax=uncultured archaeon RepID=Q2Y4F7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KCZ70283.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_110_30
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

25786..26520
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BP9_METBF
Uncharacterized protein {ECO:0000313|EMBL:KCZ70284.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Transcriptional repressor of nif and glnA operons
Displaying items 1-30 of 61 in total

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