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LC_0.1_scaffold_128

Search features with annotation key words

Displaying items 1-30 of 57 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LC_0.1_scaffold_128_1
unknown

Not on your lists

3..146
DNA (144bp) protein (48aa)

This feature has no annotations

LC_0.1_scaffold_128_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

197..1447
DNA (1251bp) protein (417aa)
Retron-type reverse transcriptase {ECO:0000313|EMBL:KCZ73266.1}; EC=2.7.7.49 {ECO:0000313|EMBL:KCZ73266.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Prophage LambdaSa1 transcriptase/maturase family protein n=1 Tax=uncultured archaeon GZfos14B8 RepID=Q64E53_9ARCH
hypothetical protein
LC_0.1_scaffold_128_3
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1821..2396
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BTY4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESS71329.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
LC_0.1_scaffold_128_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2909..4330
DNA (1422bp) protein (474aa)
FAD linked oxidase domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4B4_SPHTD
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:KCZ71410.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
FAD linked oxidase domain-containing protein
LC_0.1_scaffold_128_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4517..4780)
DNA (264bp) protein (88aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_128_6
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(5235..5561)
DNA (327bp) protein (109aa)
Tax=RBG_16_Chloroflexi_57_11_curated
LC_0.1_scaffold_128_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5672..6457)
DNA (786bp) protein (262aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:KCZ72558.1}; EC=4.2.1.75 {ECO:0000313|EMBL:KCZ72558.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Uroporphyrinogen-III synthase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MG99_9EURY
hemD; uroporphyrinogen-III synthase
LC_0.1_scaffold_128_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(6486..7229)
DNA (744bp) protein (248aa)
Uroporphyrinogen-III methyltransferase (EC:2.1.1.107)
Uroporphyrinogen-III methyltransferase n=2 Tax=Methanosarcina mazei RepID=M1Q6J2_METMZ
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_128_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7222..8187)
DNA (966bp) protein (322aa)
Probable porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=2 Tax=root RepID=M1QB73_9ZZZZ
LC_0.1_scaffold_128_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8184..9449)
DNA (1266bp) protein (422aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=GSA_METMA
LC_0.1_scaffold_128_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9595..10539
DNA (945bp) protein (315aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72437.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_128_12
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

10822..11895
DNA (1074bp) protein (358aa)
Dolichol-phosphate mannosyltransferase, fused to membrane-bound GtrA-like domain n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JES4_THEKO
fused dolichol-phosphate mannosyltransferase/GtrA-like domain-containing protein
Tax=CG_Dehalo_01
LC_0.1_scaffold_128_13
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11985..13586
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Paenibacillus mucilaginosus (strain KNP414) RepID=F8FQI0_PAEMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI39241.1}; TaxID=1036673 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus (strain KNP414).;"
LC_0.1_scaffold_128_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13648..14379
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JC20_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KCZ70384.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_128_trna_1
unknown

Not on your lists

comp(14404..14478)
DNA (75bp)
transferRNA Met
LC_0.1_scaffold_128_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14603..15604
DNA (1002bp) protein (334aa)
Putative daunorubicin resistance ABC transporter, ATP-binding protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEZ6_9EURY
Daunorubicin resistance ABC transporter ATP-binding subunit {ECO:0000313|EMBL:KCZ71315.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative daunorubicin resistance ABC transporter, ATP-binding protein
LC_0.1_scaffold_128_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15604..16368
DNA (765bp) protein (255aa)
Daunorubicin resistance ABC transporter inner membrane subunit B n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MG61_9EURY
Daunorubicin resistance ABC transporter membrane protein {ECO:0000313|EMBL:KCZ71314.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
daunorubicin resistance ABC transporter inner membrane subunit B
LC_0.1_scaffold_128_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16370..17281
DNA (912bp) protein (304aa)
2-phospho-L-lactate transferase {ECO:0000256|HAMAP-Rule:MF_01257}; EC=2.7.8.28 {ECO:0000256|HAMAP-Rule:MF_01257};; LPPG:FO 2-phospho-L-lactate transferase {ECO:0000256|HAMAP-Rule:MF_01257}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
2-phospho-L-lactate transferase n=2 Tax=Methanosarcina acetivorans RepID=COFD_METAC
2-phospho-L-lactate transferase
LC_0.1_scaffold_128_18

Not on your lists

17337..18452
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JDX9_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH36737.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
LC_0.1_scaffold_128_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(18466..18768)
DNA (303bp) protein (101aa)
UPI0003D1A58D related cluster n=1 Tax=unknown RepID=UPI0003D1A58D
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_128_20
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(18785..18994)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQD0_METZD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_128_21
unknown

Not on your lists

19079..19393
DNA (315bp) protein (105aa)

This feature has no annotations

LC_0.1_scaffold_128_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19397..19732)
DNA (336bp) protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71160.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_128_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20304..21548)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q464V9_METBF
Uncharacterized protein {ECO:0000313|EMBL:KCZ71159.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Transcriptional regulator
LC_0.1_scaffold_128_24
unknown

Not on your lists

comp(21604..21834)
DNA (231bp) protein (77aa)

This feature has no annotations

LC_0.1_scaffold_128_25
unknown

Not on your lists

comp(21845..21991)
DNA (147bp) protein (49aa)

This feature has no annotations

LC_0.1_scaffold_128_26
unknown

Not on your lists

22717..22878
DNA (162bp) protein (54aa)

This feature has no annotations

LC_0.1_scaffold_128_27
Cyanothece sp. ATCC 51142, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

23043..23360
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Cyanothece RepID=B1WQG8_CYAA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB51679.1}; TaxID=43989 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain ATCC 51142).;"
LC_0.1_scaffold_128_28
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

23648..24229
DNA (582bp) protein (194aa)
Nucleotidyltransferase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZLK2_THELI
nucleotidyltransferase
Nucleotidyltransferase {ECO:0000313|EMBL:EHR79140.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 /; NS-C).;"
LC_0.1_scaffold_128_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24253..25578)
DNA (1326bp) protein (442aa)
PmbA/TldD family protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MC56_9EURY
Putative Zn-dependent protease-like protein {ECO:0000313|EMBL:KCZ71048.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
PmbA/TldD family protein
Displaying items 1-30 of 57 in total

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