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LC_0.1_scaffold_173

Search features with annotation key words

Displaying items 1-30 of 115 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LC_0.1_scaffold_173_1
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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209..577
DNA (369bp) protein (123aa)
Death-on-curing family protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BX54_METCG
death-on-curing family protein
Death-on-curing family protein {ECO:0000313|EMBL:AEB68610.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC; 103675 / OCM 69 / GP-6) (Methanothrix concilii).;"
LC_0.1_scaffold_173_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(1057..1341)
DNA (285bp) protein (95aa)
chorismate mutase (EC:5.4.99.5)
Chorismate mutase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XK1_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_173_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(1332..2183)
DNA (852bp) protein (284aa)
shikimate kinase (EC:2.7.1.71)
UPI0003D1BB5B related cluster n=1 Tax=unknown RepID=UPI0003D1BB5B
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_173_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2199..2741)
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EBJ2_METMS
Uncharacterized protein {ECO:0000313|EMBL:KCZ70484.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_173_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2758..4377)
DNA (1620bp) protein (540aa)
O-phosphoserine--tRNA(Cys) ligase {ECO:0000256|HAMAP-Rule:MF_01674}; Short=O-phosphoserine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01674};; EC=6.1.1.27 {ECO:0000256|HAMAP-Rule:MF_01674};; Non-canonical O-phosphoseryl-tRNA(Cys) synthetase {ECO:0000256|HAMAP-Rule:MF_01674}; O-phosphoseryl-tRNA(Cys) synthetase {ECO:0000256|HAMAP-Rule:MF_01674}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
O-phosphoserine--tRNA(Cys) ligase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KTS1_METHD
O-phosphoseryl-tRNA(Cys) synthetase
LC_0.1_scaffold_173_6
unknown

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comp(4414..4578)
DNA (165bp) protein (55aa)

This feature has no annotations

LC_0.1_scaffold_173_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(4575..5669)
DNA (1095bp) protein (365aa)
Chorismate synthase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q4A3_METMZ
Chorismate synthase
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_173_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5721..5927
DNA (207bp) protein (69aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQG1_METZD
4Fe-4S ferredoxin
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_173_9
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6576..8768)
DNA (2193bp) protein (731aa)
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQL2_METH6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET65646.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strain 6Ac).;"
LC_0.1_scaffold_173_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9038..10072
DNA (1035bp) protein (345aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73263.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_173_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10069..10578
DNA (510bp) protein (170aa)
Riboflavin synthase {ECO:0000256|PIRNR:PIRNR015750}; EC=2.5.1.9 {ECO:0000256|PIRNR:PIRNR015750};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Riboflavin synthase n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I4B7_METB6
riboflavin synthase
LC_0.1_scaffold_173_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10588..10896
DNA (309bp) protein (103aa)
Cupin 2 conserved barrel domain protein id=3738594 bin=GWF2_Planctomycetes_42_9 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
cupin domain-containing protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_173_trna_1
unknown

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10972..11044
DNA (73bp)
transferRNA Asn
LC_0.1_scaffold_173_trna_2
unknown

Not on your lists

11065..11139
DNA (75bp)
transferRNA Met
LC_0.1_scaffold_173_13
unknown

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comp(11727..11915)
DNA (189bp) protein (63aa)

This feature has no annotations

LC_0.1_scaffold_173_14
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(11942..12145)
DNA (204bp) protein (68aa)
hypothetical protein id=14631563 bin=bin9_gal15 species=Brevibacillus panacihumi genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
glyoxalase domain-containing protein
Tax=CSP1_3_Armatimonadetes
LC_0.1_scaffold_173_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

12219..12593
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos37B2 RepID=Q648N9_9ARCH
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_173_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12728..12886
DNA (159bp) protein (53aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71838.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_173_17
unknown

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comp(12994..13461)
DNA (468bp) protein (156aa)

This feature has no annotations

LC_0.1_scaffold_173_18
unknown

Not on your lists

13702..13830
DNA (129bp) protein (43aa)

This feature has no annotations

LC_0.1_scaffold_173_19
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13851..13979
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNR8_METZD
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_173_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

14316..14948
DNA (633bp) protein (211aa)
Methyltransferase type 12 id=2241978 bin=GWB2_Chloroflexi_49_20 species=Guillardia theta genus=Guillardia taxon_order=Pyrenomonadales taxon_class=Cryptophyta phylum=unknown tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
methyltransferase type 12
Tax=RBG_13_Bathyarchaeota_38_9_curated
LC_0.1_scaffold_173_21
unknown

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15125..15307
DNA (183bp) protein (61aa)

This feature has no annotations

LC_0.1_scaffold_173_22
unknown

Not on your lists

15289..15450
DNA (162bp) protein (54aa)

This feature has no annotations

LC_0.1_scaffold_173_23
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15820..16416
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TJJ9_ALKMQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR46367.1}; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
LC_0.1_scaffold_173_24
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(16590..17516)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NMI1_MARHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB12151.1}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
LC_0.1_scaffold_173_25
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17473..18000)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKB8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB75085.1}; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;"
LC_0.1_scaffold_173_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18201..18593
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos37B2 RepID=Q648N9_9ARCH
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ71000.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
transcriptional regulator, TrmB
LC_0.1_scaffold_173_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18600..19904)
DNA (1305bp) protein (435aa)
NADH dehydrogenase, FAD-containing subunit {ECO:0000313|EMBL:KCZ70380.1}; EC=1.6.99.3 {ECO:0000313|EMBL:KCZ70380.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative oxidoreductase id=1915229 bin=GWB2_Deltaproteobacteria_65_81 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
putative oxidoreductase
LC_0.1_scaffold_173_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20110..20394)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EHJ4_GEOBB
Uncharacterized protein {ECO:0000313|EMBL:KCZ70848.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
Displaying items 1-30 of 115 in total

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