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LC_0.1_scaffold_297

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Displaying items 1-30 of 75 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LC_0.1_scaffold_297_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3..1118
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W0F0_UNCMA
Uncharacterized protein {ECO:0000313|EMBL:KCZ71190.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_297_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1096..1917
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZL5_METPS
DNA repair photolyase {ECO:0000313|EMBL:KCZ72504.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_297_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

1969..2460
DNA (492bp) protein (164aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_297_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2493..3005
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XL20_METZD
ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase {ECO:0000313|EMBL:KCZ72333.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_297_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3002..4000
DNA (999bp) protein (333aa)
Homoserine dehydrogenase {ECO:0000313|EMBL:KCZ72332.1}; EC=1.1.1.3 {ECO:0000313|EMBL:KCZ72332.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8W7_METEZ
LC_0.1_scaffold_297_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

3997..4989
DNA (993bp) protein (331aa)
Met-10+ related protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TP54_METAC
Met-10+ related protein
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_297_7

Not on your lists

5044..5481
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9X8_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH38908.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
LC_0.1_scaffold_297_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(5522..8260)
DNA (2739bp) protein (913aa)
Cell surface protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMJ5_METH6
Cell surface protein
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_297_9
RBG_13_Bacteroidetes_46_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8454..8972)
DNA (519bp) protein (173aa)
Nitroreductase family protein n=1 Tax=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) RepID=Q8KG48_CHLTE
nitroreductase
Tax=RBG_13_Bacteroidetes_46_8_curated
LC_0.1_scaffold_297_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9055..10815)
DNA (1761bp) protein (587aa)
UvrABC system protein C n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBR0_METEZ
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
excinuclease ABC subunit C
LC_0.1_scaffold_297_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10812..13649)
DNA (2838bp) protein (946aa)
UvrABC system protein A n=1 Tax=Thermincola potens (strain JR) RepID=D5XCB4_THEPJ
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
excinuclease ABC subunit A
LC_0.1_scaffold_297_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13738..14100)
DNA (363bp) protein (121aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72821.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_297_13
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14229..14477)
DNA (249bp) protein (83aa)
Addiction module toxin, RelE/StbE family id=3744481 bin=GWF2_Ignavibacteria_33_9 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
addiction module antitoxin
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_297_14
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14470..14670)
DNA (201bp) protein (67aa)
id=3436219 bin=GWB1_CP_36_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_297_15
Methylococcaceae bacterium Sn10-6, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14683..15315)
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=B6EWV8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJV07117.1}; TaxID=1632867 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae.;" source="Methylococcaceae bacterium Sn10-6.;"
hypothetical protein
LC_0.1_scaffold_297_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15423..16103
DNA (681bp) protein (227aa)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
deoxyribonuclease V (EC:3.1.21.7)
Endonuclease V n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EB43_METEZ
LC_0.1_scaffold_297_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16095..16670)
DNA (576bp) protein (192aa)
UPI0003D1AF49 related cluster n=1 Tax=unknown RepID=UPI0003D1AF49
Nitroreductase {ECO:0000313|EMBL:KCZ72840.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nitroreductase
LC_0.1_scaffold_297_18
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16905..17267)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L020_METHD
Protein of unknown function (DUF3467)
Uncharacterized protein {ECO:0000313|EMBL:AGB49599.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
LC_0.1_scaffold_297_19
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17279..17740)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z0D4_METPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI62156.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
LC_0.1_scaffold_297_20
unknown

Not on your lists

18487..18612
DNA (126bp) protein (42aa)

This feature has no annotations

LC_0.1_scaffold_297_21
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18602..19276)
DNA (675bp) protein (225aa)
Hydrogenase accessory protein HypB n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9REP8_METVM
hydrogenase nickel incorporation protein HypB
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_297_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19472..20650)
DNA (1179bp) protein (393aa)
Putative 8-amino-7-oxononanoate synthase {ECO:0000313|EMBL:KCZ72259.1}; EC=2.3.1.29 {ECO:0000313|EMBL:KCZ72259.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
pyridoxal phosphate-dependent acyltransferase (EC:2.3.1.29)
8-amino-7-oxononanoate synthase n=1 Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=BIOF_THEM4
LC_0.1_scaffold_297_23
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

20736..21767
DNA (1032bp) protein (344aa)
Probable L-threonine 3-dehydrogenase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LJ35_THEBM
L-threonine 3-dehydrogenase
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_297_24
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21811..22638)
DNA (828bp) protein (276aa)
Transcriptional regulator n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WY6_METBU
transcriptional regulator, ArsR family
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AKB76034.1}; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;"
LC_0.1_scaffold_297_25
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22969..24204
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46G43_METBF
GTPases-Sulfate adenylate transferase subunit 1 {ECO:0000313|EMBL:AKB17869.1}; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WWM596.;"
GTPases - Sulfate adenylate transferase subunit 1
LC_0.1_scaffold_297_26
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

24302..25321
DNA (1020bp) protein (340aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12Y32_METBU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE51644.1}; Flags: Precursor;; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 /; ACE-M).;"
LC_0.1_scaffold_297_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25474..26367)
DNA (894bp) protein (298aa)
Formylmethanofuran--tetrahydromethanopterin formyltransferase {ECO:0000256|HAMAP-Rule:MF_00579}; EC=2.3.1.101 {ECO:0000256|HAMAP-Rule:MF_00579};; H4MPT formyltransferase {ECO:0000256|HAMAP-Rule:MF_00579}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
formylmethanofuran/tetrahydromethanopterin N-formyltransferase (EC:2.3.1.101)
Formylmethanofuran--tetrahydromethanopterin formyltransferase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XL43_METZD
LC_0.1_scaffold_297_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(26456..26716)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5U3_METEZ
Putative metal-binding protein {ECO:0000313|EMBL:KCZ73567.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_297_29
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(26899..27393)
DNA (495bp) protein (165aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_297_30
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

27482..28729
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NS41_HALUD
Putative flavin-nucleotide-binding protein {ECO:0000313|EMBL:KCZ73565.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
Displaying items 1-30 of 75 in total

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