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LC_0.1_scaffold_359

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Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LC_0.1_scaffold_359_1
unknown

Not on your lists

1..591
DNA (591bp) protein (197aa)

This feature has no annotations

LC_0.1_scaffold_359_trna_1
unknown

Not on your lists

639..734
DNA (96bp)
transferRNA Gly
LC_0.1_scaffold_359_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(781..1539)
DNA (759bp) protein (253aa)
putative circadian clock protein KaiC (EC:2.7.11.1)
Putative circadian clock protein, KaiC n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5S6_METEZ
RecA-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:KCZ71147.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_359_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1913..2893
DNA (981bp) protein (327aa)
5,10-methylenetetrahydromethanopterin reductase {ECO:0000256|HAMAP-Rule:MF_01091}; EC=1.5.98.2 {ECO:0000256|HAMAP-Rule:MF_01091};; Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase {ECO:0000256|HAMAP-Rule:MF_01091}; Methylene-H(4)MPT reductase {ECO:0000256|HAMAP-Rule:MF_01091}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MQS9_9EURY
5,10-methylenetetrahydromethanopterin reductase
LC_0.1_scaffold_359_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2895..4280
DNA (1386bp) protein (462aa)
Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XN91_METZD
Coenzyme F420-reducing hydrogenase, beta subunit {ECO:0000313|EMBL:KCZ71525.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein
LC_0.1_scaffold_359_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

4342..4797
DNA (456bp) protein (152aa)
Nicotinamide-nucleotide adenylyltransferase, NadM family (EC:2.7.7.1)
Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=NADM_METBF
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_359_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4798..5520)
DNA (723bp) protein (241aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1QIX9_METMZ
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
LC_0.1_scaffold_359_7
unknown

Not on your lists

5735..6334
DNA (600bp) protein (200aa)

This feature has no annotations

LC_0.1_scaffold_359_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6343..7317)
DNA (975bp) protein (325aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72949.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_359_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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7411..7935
DNA (525bp) protein (175aa)
3-isopropylmalate dehydratase small subunit n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5Z3_METEZ
3-isopropylmalate dehydratase small subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_359_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7987..8334)
DNA (348bp) protein (116aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71970.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_359_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8508..9029
DNA (522bp) protein (174aa)
Precorrin-6Y C5,15-methyltransferase (Decarboxylating), CbiT subunit {ECO:0000313|EMBL:KCZ71785.1}; EC=2.1.1.196 {ECO:0000313|EMBL:KCZ71785.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Probable cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating] n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=CBIT_METAC
cbiT; precorrin-8W decarboxylase
LC_0.1_scaffold_359_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9023..10345
DNA (1323bp) protein (441aa)
Precorrin-4 C11-methyltransferase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNA3_METZD
Precorrin-4 C11-methyltransferase {ECO:0000313|EMBL:KCZ71786.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
precorrin-4 C(11)-methyltransferase
LC_0.1_scaffold_359_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10338..11204
DNA (867bp) protein (289aa)
Cobalamin biosynthesis protein CbiG {ECO:0000313|EMBL:KCZ71787.1}; EC=3.7.1.12 {ECO:0000313|EMBL:KCZ71787.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Cobalamin biosynthesis protein CbiG n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAR2_METCZ
cbiG; Cobalamin biosynthesis protein CbiG
LC_0.1_scaffold_359_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11179..11940
DNA (762bp) protein (254aa)
Precorrin-3B C17-methyltransferase {ECO:0000313|EMBL:KCZ71788.1}; EC=2.1.1.131 {ECO:0000313|EMBL:KCZ71788.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Precorrin-3B C17-methyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46ET4_METBF
Cobalt-precorrin-3b C17-methyltransferase
LC_0.1_scaffold_359_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11930..12559
DNA (630bp) protein (210aa)
Precorrin isomerase {ECO:0000313|EMBL:KCZ71789.1}; EC=5.4.99.61 {ECO:0000313|EMBL:KCZ71789.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1B022 related cluster n=1 Tax=unknown RepID=UPI0003D1B022
precorrin-8X methylmutase CbiC/CobH
LC_0.1_scaffold_359_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12624..13802)
DNA (1179bp) protein (393aa)
Digeranylgeranylglycerophospholipid reductase {ECO:0000256|HAMAP-Rule:MF_01287}; Short=DGGGPL reductase {ECO:0000256|HAMAP-Rule:MF_01287};; EC=1.3.99.34 {ECO:0000256|HAMAP-Rule:MF_01287};; 2,3-bis-O-geranylgeranylglyceryl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01287}; Geranylgeranyl reductase {ECO:0000256|HAMAP-Rule:MF_01287}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Digeranylgeranylglycerophospholipid reductase 2 n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=GGR2_METBU
geranylgeranyl reductase
LC_0.1_scaffold_359_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(13799..13972)
DNA (174bp) protein (58aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6G9_METEZ
4Fe-4S ferredoxin
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_359_trna_2
unknown

Not on your lists

comp(14047..14120)
DNA (74bp)
transferRNA Ile
LC_0.1_scaffold_359_18
GWA1_OP11_43_11, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

14316..14903
DNA (588bp) protein (196aa)
OsmC family protein n=1 Tax=Thermus scotoductus (strain ATCC 700910 / SA-01) RepID=E8PQC6_THESS
OsmC family protein {ECO:0000313|EMBL:KKS84554.1}; TaxID=1618436 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA1_43_11.;"
OsmC family protein
LC_0.1_scaffold_359_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(14958..15386)
DNA (429bp) protein (143aa)
Glutamine amidotransferase (Class I) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W1E4_UNCMA
glutamine amidotransferase (class I)
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_359_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15426..15659)
DNA (234bp) protein (78aa)
Glutamine amidotransferase (Class I) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W1E4_UNCMA
GMP synthase family protein {ECO:0000313|EMBL:KCZ73688.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
glutamine amidotransferase (class I)
LC_0.1_scaffold_359_21
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15754..16221
DNA (468bp) protein (156aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_359_22
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

16253..18037
DNA (1785bp) protein (595aa)
Peptide ABC transporter substrate-binding protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LA99_HALJP
peptide ABC transporter substrate-binding protein
Tax=RBG_13_Chloroflexi_48_17_curated
LC_0.1_scaffold_359_23
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

18121..19083
DNA (963bp) protein (321aa)
Dipeptide/oligopeptide/nickel ABC transporter permease n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LGG3_9EURY
dppB3; dipeptide/oligopeptide/nickel ABC transporter permease
Tax=RBG_13_Chloroflexi_48_17_curated
LC_0.1_scaffold_359_24
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

19085..19987
DNA (903bp) protein (301aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LF78_9EURY
binding-protein-dependent transport system inner membrane protein
Tax=RBG_13_Chloroflexi_48_17_curated
LC_0.1_scaffold_359_25
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

19968..20942
DNA (975bp) protein (325aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL) RepID=E4Q423_CALOW
oligopeptide/dipeptide ABC transporter ATPase subunit
Tax=RBG_16_Chloroflexi_50_9_curated
LC_0.1_scaffold_359_26
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

20944..21867
DNA (924bp) protein (308aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E2U3_DICTD
oligopeptide/dipeptide ABC transporter ATPase
Tax=RBG_16_Chloroflexi_50_9_curated
LC_0.1_scaffold_359_27
GWC2_Nitrospirae_42_7_curated, Nitrospirae, Bacteria

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21984..22991
DNA (1008bp) protein (336aa)
Ammonium transporter id=4907829 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
ammonium transporter
Tax=GWC2_Nitrospirae_42_7_curated
LC_0.1_scaffold_359_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22984..23355
DNA (372bp) protein (124aa)
Nitrogen regulatory protein P-II n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z7G0_DEHE1
Nitrogen regulatory protein PII {ECO:0000313|EMBL:KCZ72261.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nitrogen regulatory protein P-II
Displaying items 1-30 of 42 in total

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