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LC_0.1_scaffold_388

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LC_0.1_scaffold_388_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(280..1134)
DNA (855bp) protein (285aa)
Transcriptional regulator, TrmB n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XTA3_9EURY
transcriptional regulator
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_388_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1287..2465
DNA (1179bp) protein (393aa)
Exporter of the RND superfamily n=1 Tax=uncultured archaeon GZfos28B8 RepID=Q64B14_9ARCH
Putative RND superfamily exporter {ECO:0000313|EMBL:KCZ73084.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_388_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2467..3615
DNA (1149bp) protein (383aa)
Conserved hypothetical membrane protein n=1 Tax=uncultured archaeon RepID=D1JAK7_9ARCH
Putative RND superfamily exporter {ECO:0000313|EMBL:KCZ73085.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
exporter of the RND superfamily protein-like protein
LC_0.1_scaffold_388_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3618..4874
DNA (1257bp) protein (419aa)
CARDB domain-containing protein {ECO:0000313|EMBL:KCZ73086.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein id=18313671 bin=Nanosalina tax=Nanosalina
hypothetical protein
LC_0.1_scaffold_388_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(4875..6473)
DNA (1599bp) protein (533aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=SYFB_METBF
LC_0.1_scaffold_388_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6704..8290
DNA (1587bp) protein (529aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70611.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
PKD domain containing protein id=4183702 bin=GWC2_Planctomycete_KSU_39_26 species=Alcanivorax dieselolei genus=Alcanivorax taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
hypothetical protein
LC_0.1_scaffold_388_trna_1
unknown

Not on your lists

8451..8540
DNA (90bp)
transferRNA Arg
LC_0.1_scaffold_388_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8561..9643
DNA (1083bp) protein (361aa)
Radical SAM domain protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IB64_ACIB4
Putative peptide-modifying radical SAM enzyme, AF0577 family {ECO:0000313|EMBL:KCZ71163.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Radical SAM domain protein
LC_0.1_scaffold_388_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9774..11690
DNA (1917bp) protein (639aa)
Carbon-monoxide dehydrogenase, catalytic subunit {ECO:0000313|EMBL:KCZ72347.1}; EC=1.2.99.2 {ECO:0000313|EMBL:KCZ72347.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
carbon-monoxide dehydrogenase, catalytic subunit (EC:1.2.99.2)
Carbon monoxide dehydrogenase n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8EJK2_9FIRM
LC_0.1_scaffold_388_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(11809..12099)
DNA (291bp) protein (97aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_388_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(12099..12290)
DNA (192bp) protein (64aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_388_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12634..13110
DNA (477bp) protein (159aa)
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:KCZ70408.1}; EC=3.6.3.41 {ECO:0000313|EMBL:KCZ70408.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ABC transporter, ATPase subunit n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XA3_METBU
ABC heme exporter, ATPase subunit
LC_0.1_scaffold_388_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13107..13796
DNA (690bp) protein (230aa)
UPI0003D1C721 related cluster n=1 Tax=unknown RepID=UPI0003D1C721
ABC-type transport system involved in cytochrome c biogenesis, permease component {ECO:0000313|EMBL:KCZ70409.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ABC heme exporter, inner membrane subunit B
LC_0.1_scaffold_388_13
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13887..14573
DNA (687bp) protein (229aa)
UPI0003D1B57B related cluster n=1 Tax=unknown RepID=UPI0003D1B57B
cytochrome c assembly protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_388_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(14578..15165)
DNA (588bp) protein (196aa)
30S ribosomal protein S3Ae n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=RS3A_METTP
30S ribosomal protein S3Ae {ECO:0000256|HAMAP-Rule:MF_00359, ECO:0000256|SAAS:SAAS00194211}; Ribosomal protein S1e {ECO:0000256|HAMAP-Rule:MF_00359}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
30S ribosomal protein S3Ae
LC_0.1_scaffold_388_trna_2
unknown

Not on your lists

15326..15408
DNA (83bp)
transferRNA Leu
LC_0.1_scaffold_388_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(15741..16028)
DNA (288bp) protein (96aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_388_16
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16062..16820)
DNA (759bp) protein (253aa)
ABC transporter related protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5P2_METTP
ABC transporter related
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_388_17
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16808..17614)
DNA (807bp) protein (269aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BDS7_9EURY
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_388_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(17614..18714)
DNA (1101bp) protein (367aa)
Nitrate ABC transporter, ATP-binding protein, putative n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29615_ARCFU
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_388_19
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18848..19366
DNA (519bp) protein (173aa)
Transcriptional regulator, XRE family n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E9K4_METMS
XRE family transcriptional regulator
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_388_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19366..19992
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W701_UNCMA
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:KCZ73073.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_388_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20059..20685
DNA (627bp) protein (209aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=Q8PU24_METMA
Putative phosphoesterase, ICC {ECO:0000313|EMBL:KCZ71154.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_388_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20685..21443
DNA (759bp) protein (253aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4M8B0_9EURY
CO dehydrogenase maturation factor {ECO:0000313|EMBL:KCZ71153.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Cobyrinic acid ac-diamide synthase
LC_0.1_scaffold_388_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


21440..22132
DNA (693bp) protein (231aa)
DNA repair and recombination protein RadB n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E605_METEZ
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DNA repair and recombination protein RadB
LC_0.1_scaffold_388_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22134..22568)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MDN2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KCZ71151.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_388_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22573..24225)
DNA (1653bp) protein (551aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71150.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_388_26
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

24426..26600
DNA (2175bp) protein (725aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W2L2_UNCMA
PBS lyase HEAT domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_388_27
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

comp(26625..27281)
DNA (657bp) protein (219aa)
Tax=CG_Elusi_03
LC_0.1_scaffold_388_28
unknown

Not on your lists

27689..27940
DNA (252bp) protein (84aa)

This feature has no annotations

Displaying items 1-30 of 39 in total

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