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LC_0.1_scaffold_396

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Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LC_0.1_scaffold_396_1
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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508..1257
DNA (750bp) protein (250aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZM4_METHD
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:AGB50140.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
LC_0.1_scaffold_396_2
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1250..2365
DNA (1116bp) protein (372aa)
ABC-type multidrug transport system, permease component n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L1H9_METHD
ABC-type multidrug transport system, permease component
ABC-type multidrug transport system, permease component {ECO:0000313|EMBL:AGB50139.1}; Flags: Precursor;; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
LC_0.1_scaffold_396_3
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2367..3353
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L161_METHD
NPCBM-associated, NEW3 domain of alpha-galactosidase
NPCBM-associated, NEW3 domain of alpha-galactosidase {ECO:0000313|EMBL:AKB43020.1}; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
LC_0.1_scaffold_396_4
unknown

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3513..3620
DNA (108bp) protein (36aa)

This feature has no annotations

LC_0.1_scaffold_396_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3610..5712
DNA (2103bp) protein (701aa)
Thioredoxin domain-containing protein {ECO:0000313|EMBL:KCZ71535.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
thioredoxin domain protein id=14426144 bin=bin1_lowGC species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
LC_0.1_scaffold_396_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(5726..6172)
DNA (447bp) protein (149aa)
30S ribosomal protein S6e n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAM3_METCZ
30S ribosomal protein S6e {ECO:0000256|HAMAP-Rule:MF_00512, ECO:0000256|SAAS:SAAS00018829}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rps6e; 30D ribosomal protein S6E
LC_0.1_scaffold_396_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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6319..6741
DNA (423bp) protein (141aa)
Ferritin, Dps family protein id=4789617 bin=GWC2_Nitrospirae-rel_56_14 species=Staphylothermus marinus genus=Staphylothermus taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Ferritin, Dps family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_396_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(7500..8345)
DNA (846bp) protein (282aa)
Ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FJ5_METBF
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_396_9
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(8417..9862)
DNA (1446bp) protein (482aa)
Blue (Type 1) copper domain protein n=1 Tax=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) RepID=A4YG15_METS5
blue (type1) copper domain-containing protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
LC_0.1_scaffold_396_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10241..11869
DNA (1629bp) protein (543aa)
ABC transporter, ATP-binding protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TIZ1_METAC
Methyl coenzyme M reductase system, component A2 {ECO:0000313|EMBL:KCZ72689.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Methyl coenzyme M reductase system component A2
LC_0.1_scaffold_396_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11942..13459
DNA (1518bp) protein (506aa)
UPF0288 protein MA_3997 n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Y3997_METAC
UPF0288 protein ANME2D_01119 {ECO:0000256|HAMAP-Rule:MF_01089}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_396_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13459..13887
DNA (429bp) protein (143aa)
Methanogenesis marker protein 6 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XME1_METZD
Putative methanogenesis marker protein 6 {ECO:0000313|EMBL:KCZ72687.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
methanogenesis marker protein 6
LC_0.1_scaffold_396_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13884..14333
DNA (450bp) protein (150aa)
Methanogenesis marker protein 5 n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBD5_METEZ
Putative methanogenesis marker protein 5 {ECO:0000313|EMBL:KCZ72686.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
methanogenesis marker protein 5
LC_0.1_scaffold_396_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14330..15574
DNA (1245bp) protein (415aa)
BadF/BadG/BcrA/BcrD ATPase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TIZ5_METAC
Putative methanogenesis marker protein 15 {ECO:0000313|EMBL:KCZ72685.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative methanogenesis marker protein 15
LC_0.1_scaffold_396_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15585..16190
DNA (606bp) protein (202aa)
Methanogenesis marker protein 17 n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBD7_METEZ
Putative methanogenesis marker protein 17 {ECO:0000313|EMBL:KCZ72684.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
methanogenesis marker protein 17
LC_0.1_scaffold_396_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16183..17109
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8W5_UNCMA
Putative methanogenesis marker protein 7 {ECO:0000313|EMBL:KCZ72683.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_396_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17187..17477)
DNA (291bp) protein (97aa)
UPI0003D1BEB2 related cluster n=1 Tax=unknown RepID=UPI0003D1BEB2
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ72502.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_396_18

Not on your lists

17625..17867
DNA (243bp) protein (81aa)
Marine sediment metagenome DNA, contig: S06H3_S24258 {ECO:0000313|EMBL:GAI50918.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
LC_0.1_scaffold_396_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18023..18178)
DNA (156bp) protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72716.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_396_20
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

18563..18802
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YIJ9_THEYD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI22005.1}; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 /; YP87).;"
LC_0.1_scaffold_396_21
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18805..19023
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SL12_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EFI35373.1}; TaxID=555779 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfonatronospira.;" source="Desulfonatronospira thiodismutans ASO3-1.;"
hypothetical protein
LC_0.1_scaffold_396_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19171..20073)
DNA (903bp) protein (301aa)
CoB--CoM heterodisulfide reductase subunit B {ECO:0000313|EMBL:KCZ71092.1}; EC=1.8.98.1 {ECO:0000313|EMBL:KCZ71092.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
CoB/CoM heterodisulfide reductase subunit B n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MC31_9EURY
CoB/CoM heterodisulfide reductase subunit B
LC_0.1_scaffold_396_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20070..20501)
DNA (432bp) protein (144aa)
CoB--CoM heterodisulfide reductase subunit C {ECO:0000313|EMBL:KCZ71093.1}; EC=1.8.98.1 {ECO:0000313|EMBL:KCZ71093.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
CoB/CoM heterodisulfide reductase subunit C (EC:1.8.98.1)
CoB/CoM heterodisulfide reductase, subunit C n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E9Q4_METEZ
LC_0.1_scaffold_396_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20569..23259)
DNA (2691bp) protein (897aa)
P-type ATPase, translocating {ECO:0000313|EMBL:KCZ73228.1}; EC=3.6.3.8 {ECO:0000313|EMBL:KCZ73228.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Cation-transporting P-type ATPase n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WRI5_METH6
cation-transporting ATPase
LC_0.1_scaffold_396_25
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

23347..24288
DNA (942bp) protein (314aa)
Na+/Ca+ antiporter, CaCA family n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BC34_METIK
CaCA family Na+/Ca+ antiporter
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_396_26
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

24395..25498
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BSY1_METCG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB68091.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC; 103675 / OCM 69 / GP-6) (Methanothrix concilii).;"
LC_0.1_scaffold_396_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

25627..26487
DNA (861bp) protein (287aa)
Universal stress protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WL66_METH6
Universal stress protein UspA-like protein {ECO:0000313|EMBL:KCZ72855.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Universal stress protein
LC_0.1_scaffold_396_28
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists

26730..27932
DNA (1203bp) protein (401aa)
sodium/hydrogen exchanger id=18248502 bin=AR5_curated_draft species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
sodium/hydrogen exchanger
Tax=CG_Micra_06
LC_0.1_scaffold_396_29
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(27958..28476)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46GC0_METBF
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_396_30
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(28838..29950)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZV1_METHD
Uncharacterized protein {ECO:0000313|EMBL:AKB24620.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. MTP4.;"
hypothetical protein
Displaying items 1-30 of 36 in total

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