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LC_0.1_scaffold_535

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LC_0.1_scaffold_535_1
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..9591
DNA (9591bp) protein (3197aa)
Uncharacterized protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CJD1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIM95999.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
hypothetical protein
LC_0.1_scaffold_535_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9939..11195)
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000382730D
Cell division protein FtsX
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_535_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11192..12451)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q467N7_METBF
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_535_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12464..13132)
DNA (669bp) protein (223aa)
ABC transporter ATP-binding protein n=1 Tax=Methanococcus maripaludis (strain S2 / LL) RepID=Q6LZV0_METMP
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:KCZ70753.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ABC transporter ATP-binding protein
LC_0.1_scaffold_535_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

13392..13544
DNA (153bp) protein (51aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_535_6
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

13663..14016
DNA (354bp) protein (118aa)
Tax=RBG_16_OP11_Levybacteria_35_11_curated
LC_0.1_scaffold_535_7
unknown

Not on your lists

14402..15049
DNA (648bp) protein (216aa)

This feature has no annotations

LC_0.1_scaffold_535_8
Pectobacterium betavasculorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15000..17246
DNA (2247bp) protein (749aa)
Uncharacterized protein n=1 Tax=Pseudozyma hubeiensis (strain SY62) RepID=R9PCJ0_PSEHS
Helicase {ECO:0000313|EMBL:KFX06197.1}; TaxID=55207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium betavasculorum.;"
LC_0.1_scaffold_535_9

Not on your lists

17439..17903
DNA (465bp) protein (155aa)
Marine sediment metagenome DNA, contig: S06H3_S16926 {ECO:0000313|EMBL:GAI37785.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
LC_0.1_scaffold_535_10
unknown

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comp(18122..18280)
DNA (159bp) protein (53aa)

This feature has no annotations

LC_0.1_scaffold_535_11
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18955..20172)
DNA (1218bp) protein (406aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PUU4_METMA
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_535_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20368..20583
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71530.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_535_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20562..20951
DNA (390bp) protein (130aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71531.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_535_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20996..21841
DNA (846bp) protein (282aa)
Exosortase EpsH-related protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RZZ7_FERPA
Archaeosortase C, PEF-CTERM variant {ECO:0000313|EMBL:KCZ72454.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Exosortase EpsH-related protein
LC_0.1_scaffold_535_15
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22332..22754
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KS42_ARCVS
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_535_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22769..24775
DNA (2007bp) protein (669aa)
Cytochrome c biogenesis factor n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F6I3_DESDL
Cytochrome c biogenesis factor {ECO:0000313|EMBL:KCZ72397.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
cytochrome c biogenesis factor
LC_0.1_scaffold_535_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

24765..25184
DNA (420bp) protein (140aa)
Putative cytochrome c biogenesis protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AEL3_CARHZ
Putative cytochrome biosynthesis protein {ECO:0000313|EMBL:KCZ72398.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
cytochrome c biogenesis protein
LC_0.1_scaffold_535_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

25181..26836
DNA (1656bp) protein (552aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72399.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_535_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

26845..27285
DNA (441bp) protein (147aa)
Putative cytochrome c biogenesis protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RYF2_FERPA
Putative cytochrome biosynthesis protein {ECO:0000313|EMBL:KCZ72400.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
cytochrome C biogenesis protein
LC_0.1_scaffold_535_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

27282..28187
DNA (906bp) protein (302aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72401.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_535_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

28207..28680
DNA (474bp) protein (158aa)
Cytochrome c oxidase subunit II n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U669_OCEP5
Uncharacterized protein {ECO:0000313|EMBL:KCZ70754.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
cytochrome c oxidase subunit ii
LC_0.1_scaffold_535_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

28691..29386
DNA (696bp) protein (232aa)
Cytochrome c biogenesis protein {ECO:0000313|EMBL:KCZ70755.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative uncharacterized protein id=4136388 bin=GWA2_Methylomirabilis_73_35 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cytochrome c biogenesis transmembrane protein
LC_0.1_scaffold_535_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

29399..29881
DNA (483bp) protein (161aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72402.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_535_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

30067..30264
DNA (198bp) protein (66aa)
YHS domain protein n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B4Y2_ACIHW
Uncharacterized protein {ECO:0000313|EMBL:KCZ71972.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
YHS domain-containing protein
LC_0.1_scaffold_535_25
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

30332..30607
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C4250
Tax=RBG_16_Chloroflexi_56_11_curated
LC_0.1_scaffold_535_26
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

30604..30999
DNA (396bp) protein (132aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_535_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

31006..31500
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RH01_MOOTA
Uncharacterized protein {ECO:0000313|EMBL:KCZ72404.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_535_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

31512..32114
DNA (603bp) protein (201aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72405.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_535_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

32122..32655
DNA (534bp) protein (178aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72406.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Displaying 29 items

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