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LC_0.1_scaffold_537

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Displaying items 1-30 of 52 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LC_0.1_scaffold_537_1
unknown

Not on your lists

119..283
DNA (165bp) protein (55aa)

This feature has no annotations

LC_0.1_scaffold_537_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(267..497)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AT5_METBF
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ72502.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_537_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(720..944)
DNA (225bp) protein (75aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_537_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1026..1700
DNA (675bp) protein (225aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1AC6D related cluster n=1 Tax=unknown RepID=UPI0003D1AC6D
3-dehydroquinate dehydratase
LC_0.1_scaffold_537_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(1786..2706)
DNA (921bp) protein (307aa)
Putative membrane-associated protein/domain protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HHL2_METFS
putative membrane-associated protein/domain protein
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_537_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(2819..4009)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HKC5_METFS
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_537_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4415..4849
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TQG8_METAC
Putative ester cyclase {ECO:0000313|EMBL:KCZ70593.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_537_8
unknown

Not on your lists

comp(4661..5119)
DNA (459bp) protein (153aa)

This feature has no annotations

LC_0.1_scaffold_537_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5250..6299
DNA (1050bp) protein (350aa)
mRNA 3-end processing factor n=2 Tax=Methanosarcina mazei RepID=M1PD05_METMZ
Putative exonuclease of the beta-lactamase fold involved in RNA processing {ECO:0000313|EMBL:KCZ70654.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
mRNA 3-end processing factor
LC_0.1_scaffold_537_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6302..6829
DNA (528bp) protein (176aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_00077}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZH5_METHD
hypothetical protein
LC_0.1_scaffold_537_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6826..7929
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XM96_METZD
Putative ATP-dependent carboligase {ECO:0000313|EMBL:KCZ70652.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_537_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7966..8478
DNA (513bp) protein (171aa)
Transcription factor E n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XM95_METZD
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Transcription initiation factor TFIIE {ECO:0000256|HAMAP-Rule:MF_01909}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
transcription factor TFIIE subunit alpha
LC_0.1_scaffold_537_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8539..8862)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EBG2_METMS
Uncharacterized protein {ECO:0000313|EMBL:KCZ70650.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_537_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9015..9332
DNA (318bp) protein (106aa)
Putative uncharacterized protein C3_0015 n=1 Tax=uncultured archaeon RepID=Q2Y4F6_9ARCH
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:KCZ70649.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
HesB/YadR/YfhF
LC_0.1_scaffold_537_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9389..9691
DNA (303bp) protein (101aa)
Nascent polypeptide-associated complex protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E8E2_METMS
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Nascent polypeptide associated complex NAC
LC_0.1_scaffold_537_16
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

9700..10512
DNA (813bp) protein (271aa)
Pyrroline-5-carboxylate reductase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MDT0_9EURY
pyrroline-5-carboxylate reductase
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_537_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10509..11318
DNA (810bp) protein (270aa)
UPI0003D1B199 related cluster n=1 Tax=unknown RepID=UPI0003D1B199
Putative methanogen marker protein 4 {ECO:0000313|EMBL:KCZ71713.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
methanogen marker protein 4
LC_0.1_scaffold_537_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11318..12112
DNA (795bp) protein (265aa)
Putative methyltransferase {ECO:0000313|EMBL:KCZ71712.1}; EC=2.1.1.228 {ECO:0000313|EMBL:KCZ71712.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1AE0E related cluster n=1 Tax=unknown RepID=UPI0003D1AE0E
hypothetical protein
LC_0.1_scaffold_537_19
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12160..12534
DNA (375bp) protein (125aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_537_20
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

12768..12956
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KPB1_ARCVS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEA47515.1}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus veneficus (strain DSM 11195 / SNP6).;"
LC_0.1_scaffold_537_21
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(12965..13372)
DNA (408bp) protein (136aa)
Nucleoside 2-deoxyribosyltransferase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E641_METEZ
nucleoside 2-deoxyribosyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_537_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13418..15595)
DNA (2178bp) protein (726aa)
YYY membrane protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KPM8_ARCVS
Chlor Arch YYY domain {ECO:0000313|EMBL:KCZ71436.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_537_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15740..16906
DNA (1167bp) protein (389aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Probable tRNA sulfurtransferase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXG1_METHD
thiazole biosynthesis/tRNA modification protein ThiI
LC_0.1_scaffold_537_24
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(16945..18306)
DNA (1362bp) protein (454aa)
Anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N413_9ARCH
anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
LC_0.1_scaffold_537_25
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(18303..19178)
DNA (876bp) protein (292aa)
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
LC_0.1_scaffold_537_26
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(19175..19594)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E928_METEZ
hypothetical protein
Tax=RBG_16_Acidobacteria_64_8_curated
LC_0.1_scaffold_537_27
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(19643..20155)
DNA (513bp) protein (171aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SLT0_9DELT
cytochrome c biogenesis protein, transmembrane region/thioredoxin-related
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_537_28
unknown

Not on your lists

20337..20558
DNA (222bp) protein (74aa)

This feature has no annotations

LC_0.1_scaffold_537_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20603..20941)
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EC19_METMS
Uncharacterized protein {ECO:0000313|EMBL:KCZ70794.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_537_30
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20938..21633)
DNA (696bp) protein (232aa)
UPF0278 protein Mzhil_0385 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPD3_METZD
UPF0278 protein ANME2D_02820 {ECO:0000256|HAMAP-Rule:MF_01078}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
Displaying items 1-30 of 52 in total

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