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LC_0.1_scaffold_901

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LC_0.1_scaffold_901_1
GWB1_OP11_39_10b, Woesebacteria, Microgenomates, Bacteria

Not on your lists

478..1491
DNA (1014bp) protein (338aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ93768.1}; TaxID=1618573 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_39_10b.;"
transmembrane_regions 7..29 id=43575 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
LC_0.1_scaffold_901_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1621..1845
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72959.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_901_3

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1854..2261
DNA (408bp) protein (136aa)
PilT protein domain protein n=1 Tax=mine drainage metagenome RepID=T1BAP5_9ZZZZ
PilT protein domain containing protein {ECO:0000313|EMBL:KEQ56861.1}; TaxID=1502293 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-N04.;"
LC_0.1_scaffold_901_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2744..3160
DNA (417bp) protein (139aa)
Nucleotidyltransferase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8THU3_METAC
Putative nucleotidyltransferase {ECO:0000313|EMBL:KCZ73318.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nucleotidyltransferase
LC_0.1_scaffold_901_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3157..3573
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GI26_METTF
Uncharacterized protein {ECO:0000313|EMBL:KCZ73319.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_901_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3935..5128)
DNA (1194bp) protein (398aa)
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:KCZ73320.1}; EC=3.6.4.13 {ECO:0000313|EMBL:KCZ73320.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ATP-dependent RNA helicase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PU01_METMA
putative ATP-dependent RNA helicase
LC_0.1_scaffold_901_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5541..6572
DNA (1032bp) protein (344aa)
Putative uncharacterized protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D427_METSW
Uncharacterized protein {ECO:0000313|EMBL:KCZ70860.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_901_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6574..7845)
DNA (1272bp) protein (424aa)
PKD domain containing protein n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FM52_9EURY
WD40-like repeat {ECO:0000313|EMBL:KCZ72883.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
pyrrolo-quinoline quinone
LC_0.1_scaffold_901_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7904..8929)
DNA (1026bp) protein (342aa)
TPR repeat n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q469C8_METBF
Tetratricopeptide repeat protein {ECO:0000313|EMBL:KCZ72882.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_901_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9163..10875
DNA (1713bp) protein (571aa)
ABC transporter related protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GX83_METFV
ATPase component of various ABC-type transport systems with duplicated ATPase domain {ECO:0000313|EMBL:KCZ72881.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ABC transporter
LC_0.1_scaffold_901_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10907..11809
DNA (903bp) protein (301aa)
Signal peptide peptidase A {ECO:0000313|EMBL:KCZ72880.1}; EC=3.4.21.- {ECO:0000313|EMBL:KCZ72880.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Proteinase IV n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TIU4_METAC
proteinase IV
LC_0.1_scaffold_901_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(11817..12701)
DNA (885bp) protein (295aa)
rRNA biogenesis protein Nop5/Nop56 n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1PXM0_METMZ
rRNA biogenesis protein {ECO:0000313|EMBL:KCZ72879.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rRNA biogenesis protein Nop5/Nop56
LC_0.1_scaffold_901_13
unknown

Not on your lists

12798..12956
DNA (159bp) protein (53aa)

This feature has no annotations

LC_0.1_scaffold_901_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13181..13753
DNA (573bp) protein (191aa)
Rubrerythrin n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K1K9_DEHLB
Rubrerythrin {ECO:0000313|EMBL:KCZ70402.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rubrerythrin
LC_0.1_scaffold_901_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13775..14197
DNA (423bp) protein (141aa)
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:KCZ70401.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_901_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14345..14548
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70475.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_901_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14545..14796)
DNA (252bp) protein (84aa)
Putative uncharacterized protein C5_0051 n=1 Tax=uncultured archaeon RepID=Q2Y4V5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KCZ72746.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_901_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15027..15986
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TQR6_METAC
Putative H4MPT-linked C1 transfer pathway protein {ECO:0000313|EMBL:KCZ72078.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative H4MPT-linked C1 transfer pathway protein
LC_0.1_scaffold_901_19
unknown

Not on your lists

comp(16051..16461)
DNA (411bp) protein (137aa)

This feature has no annotations

LC_0.1_scaffold_901_20
unknown

Not on your lists

comp(16458..16694)
DNA (237bp) protein (79aa)

This feature has no annotations

LC_0.1_scaffold_901_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16827..17876
DNA (1050bp) protein (350aa)
Peptidase family protein {ECO:0000313|EMBL:KCZ72884.1}; EC=3.2.1.4 {ECO:0000313|EMBL:KCZ72884.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
cellulase (EC:3.2.1.4)
Archaeal aminopeptidase or endoglucanase M n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XZ9_METBU
LC_0.1_scaffold_901_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18021..19427
DNA (1407bp) protein (469aa)
Putative (R)-citramalate synthase CimA {ECO:0000256|HAMAP-Rule:MF_01028}; EC=2.3.1.182 {ECO:0000256|HAMAP-Rule:MF_01028};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
(R)-citramalate synthase (EC:2.3.3.-)
UPI0003D1A487 related cluster n=1 Tax=unknown RepID=UPI0003D1A487
LC_0.1_scaffold_901_23
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

19470..21149
DNA (1680bp) protein (560aa)
acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQ35_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_901_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21155..21655
DNA (501bp) protein (167aa)
Acetolactate synthase, small subunit {ECO:0000313|EMBL:KCZ72887.1}; EC=2.2.1.6 {ECO:0000313|EMBL:KCZ72887.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ilvH; acetolactate synthase 3 regulatory subunit (EC:2.2.1.6)
Acetolactate synthase small subunit n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PZ25_METMA
LC_0.1_scaffold_901_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


21859..22221
DNA (363bp) protein (121aa)
50S ribosomal protein L18e n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TI7_METBU
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
50S ribosomal protein L18e
LC_0.1_scaffold_901_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


22226..22645
DNA (420bp) protein (140aa)
50S ribosomal protein L13 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XLP4_METZD
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
50S ribosomal protein L13
LC_0.1_scaffold_901_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


22655..23053
DNA (399bp) protein (133aa)
30S ribosomal protein S9 n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7A2_METMS
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
30S ribosomal protein S9P
LC_0.1_scaffold_901_trna_1
unknown

Not on your lists

23246..23320
DNA (75bp)
transferRNA Pro
LC_0.1_scaffold_901_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

23456..23689
DNA (234bp) protein (78aa)
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RNA polymerase Rpb6 n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RIU2_METP4
RNA polymerase Rpb6
LC_0.1_scaffold_901_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


23702..24328
DNA (627bp) protein (209aa)
30S ribosomal protein S2 n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WLX6_METH6
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000256|SAAS:SAAS00012212}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
30S ribosomal protein S2P
Displaying items 1-30 of 32 in total

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