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LC_0.1_scaffold_935

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LC_0.1_scaffold_935_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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179..409
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72155.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_935_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(414..1349)
DNA (936bp) protein (312aa)
Putative ABC transporter n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YVK1_METPS
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:KCZ72156.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative ABC transporter
LC_0.1_scaffold_935_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1378..1653)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSP9_METAC
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:KCZ72772.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_935_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1801..2364)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B79AC1
Conserved Archaeal protein (DUF2204) {ECO:0000313|EMBL:KCZ73107.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_935_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2351..2542)
DNA (192bp) protein (64aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73108.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_935_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

2752..3177
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BTE4_METCG
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_935_7
unknown

Not on your lists

3447..3713
DNA (267bp) protein (89aa)

This feature has no annotations

LC_0.1_scaffold_935_8
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

3863..4483
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000371C2EC
transcriptional regulator
Tax=RBG_16_Thaumarchaeota_49_8_curated
LC_0.1_scaffold_935_9
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

4455..4874
DNA (420bp) protein (140aa)
Tax=RBG_16_Archaea_50_20_curated
LC_0.1_scaffold_935_10
unknown

Not on your lists

5067..6368
DNA (1302bp) protein (434aa)

This feature has no annotations

LC_0.1_scaffold_935_11
unknown

Not on your lists

6427..7014
DNA (588bp) protein (196aa)

This feature has no annotations

LC_0.1_scaffold_935_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7352..7576
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71913.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LC_0.1_scaffold_935_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7573..8010
DNA (438bp) protein (146aa)
Putative nucleic acid-binding protein, contains PIN domain protein n=1 Tax=Halonotius sp. J07HN4 RepID=U1PAE7_9EURY
Putative nucleic acid-binding protein, contains PIN domain {ECO:0000313|EMBL:KCZ71914.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_935_14
unknown

Not on your lists

8212..9072
DNA (861bp) protein (287aa)

This feature has no annotations

LC_0.1_scaffold_935_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9126..11732
DNA (2607bp) protein (869aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAT9_METEZ
Uncharacterized protein {ECO:0000313|EMBL:KCZ72773.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_935_16
unknown

Not on your lists

comp(11737..11838)
DNA (102bp) protein (34aa)

This feature has no annotations

LC_0.1_scaffold_935_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11932..12435
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XAY8_THEPJ
Putative metal-binding protein {ECO:0000313|EMBL:KCZ72774.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_935_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12527..12733
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ABR0_CARHZ
Uncharacterized protein {ECO:0000313|EMBL:KCZ70894.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
LC_0.1_scaffold_935_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12737..13660)
DNA (924bp) protein (308aa)
Carbamate kinase n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AIZ8_PYRYC
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
carbamate kinase-like carbamoyl phosphate synthetase
LC_0.1_scaffold_935_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13899..15407)
DNA (1509bp) protein (503aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
lysK; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B789_METTP
LC_0.1_scaffold_935_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15476..15934
DNA (459bp) protein (153aa)
Cytidyltransferase-related enzyme {ECO:0000313|EMBL:KCZ71722.1}; EC=2.7.7.3 {ECO:0000313|EMBL:KCZ71722.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Phosphopantetheine adenylyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=COAD_METBF
pantetheine-phosphate adenylyltransferase
LC_0.1_scaffold_935_22
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

16013..16894
DNA (882bp) protein (294aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12YZ2_METBU
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_935_23
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

17122..18303
DNA (1182bp) protein (394aa)
methionine gamma-lyase (EC:4.4.1.11)
Methionine gamma-lyase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RY77_THEOJ
Tax=RBG_16_Euryarchaeota_41_19_curated
LC_0.1_scaffold_935_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18508..20970
DNA (2463bp) protein (821aa)
Aconitase B {ECO:0000313|EMBL:KCZ71576.1}; EC=4.2.1.3 {ECO:0000313|EMBL:KCZ71576.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase 2 n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8N2U0_9CYAN
LC_0.1_scaffold_935_25
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21106..22056
DNA (951bp) protein (317aa)
UPI0003D1AA2C related cluster n=1 Tax=unknown RepID=UPI0003D1AA2C
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_935_26
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22173..22862
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TTY1_METAC
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_935_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22912..24501)
DNA (1590bp) protein (530aa)
Archaeal glutamate synthase [NADPH] n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B9A6_METTP
Glutamate synthase family protein {ECO:0000313|EMBL:KCZ71574.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ferredoxin-dependent glutamate synthase
LC_0.1_scaffold_935_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24644..24997)
DNA (354bp) protein (118aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
methionine sulfoxide reductase A n=1 Tax=Meiothermus timidus RepID=UPI000371683C
peptide methionine sulfoxide reductase
Displaying 28 items

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